Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06239 | Soybean | nucleus | 92.93 | 92.43 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 66.85 | 67.58 |
| Solyc03g122030.1.1 | Tomato | nucleus | 62.5 | 63.36 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 63.59 | 62.73 |
| CDX75751 | Canola | nucleus | 51.9 | 51.34 |
| CDY33246 | Canola | nucleus | 41.58 | 50.0 |
| CDY39101 | Canola | nucleus, plastid | 40.76 | 49.18 |
| Bra021536.1-P | Field mustard | nucleus | 40.76 | 49.02 |
| CDY39099 | Canola | nucleus | 42.12 | 48.9 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 40.76 | 48.39 |
| AT3G14180.1 | Thale cress | nucleus | 55.16 | 45.82 |
| CDY61477 | Canola | nucleus, plastid | 37.23 | 45.51 |
| CDY02487 | Canola | nucleus, plastid | 36.96 | 44.16 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 35.33 | 43.19 |
| Bra014370.1-P | Field mustard | nucleus | 38.32 | 42.09 |
| CDY08216 | Canola | nucleus | 37.5 | 42.07 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 38.32 | 41.35 |
| AT1G54060.1 | Thale cress | nucleus | 42.66 | 40.99 |
| Bra030909.1-P | Field mustard | nucleus | 13.86 | 39.84 |
| CDY51405 | Canola | nucleus | 13.59 | 39.37 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 38.59 | 39.23 |
| CDY26148 | Canola | nucleus, plastid | 37.5 | 38.66 |
| Zm00001d025514_P001 | Maize | nucleus | 38.59 | 36.22 |
| KRH22283 | Soybean | nucleus | 29.89 | 35.95 |
| KRH21272 | Soybean | nucleus | 30.43 | 35.9 |
| KRH27047 | Soybean | nucleus | 29.62 | 35.5 |
| Os04t0445600-00 | Rice | nucleus | 39.95 | 35.25 |
| EES12241 | Sorghum | nucleus | 38.86 | 35.05 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 38.04 | 34.65 |
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 38.86 | 34.62 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 39.13 | 34.62 |
| Zm00001d003549_P001 | Maize | nucleus | 36.14 | 34.55 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 38.86 | 34.38 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 33.97 | 33.78 |
| Os02t0565000-01 | Rice | nucleus | 36.41 | 31.98 |
| KRH11016 | Soybean | nucleus | 21.47 | 31.6 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 34.51 | 31.59 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 35.6 | 31.49 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 35.6 | 31.49 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 35.33 | 31.1 |
| CDY33093 | Canola | cytosol, plastid | 34.78 | 29.29 |
| KXG30464 | Sorghum | nucleus, plastid | 32.61 | 28.44 |
| Zm00001d010753_P001 | Maize | nucleus | 24.73 | 27.74 |
| KRH09846 | Soybean | nucleus | 24.18 | 22.42 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 13.59 | 22.32 |
| KRH23479 | Soybean | nucleus | 23.1 | 22.14 |
| KRH48419 | Soybean | nucleus | 20.65 | 21.11 |
| KRH39263 | Soybean | nucleus | 20.38 | 18.89 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 27.17 | 15.06 |
Protein Annotations
| EMBL:ACUP02004157 | EnsemblPlants:KRH47662 | EnsemblPlantsGene:GLYMA_07G042800 | EntrezGene:100812599 | PANTHER:PTHR31307 | PFAM:PF13837 |
| ProteinID:KRH47662 | ProteinID:KRH47662.1 | SEG:seg | UniParc:UPI0002338D75 | UniProt:I1KHF7 | MapMan:15.5.20 |
Description
hypothetical protein
Coordinates
chr7:-:3561184..3563334
Molecular Weight (calculated)
39858.7 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.924
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDDEIQSH PSPASGSPPS SPRANGRITV TVAAPAPPPP PNSLALALPI QQPAKGNGGG GGGGGGREDC WSEGATAVLI DAWGERYLEL SRGNLKQKHW
101: KEVADIVSVR EDYTKAPKTD IQCKNRIDTV KKKYKSEKAK IAAGATSKWP FYDRLEQLIG PSAKIPGVGG ASGTSAAGNS NLQPQKVPLG IPVGVRGGAN
201: QFNHPHKQPQ PVPLKNQKIQ FRRRGPPVES DSEERDASSP ASSDSFPPES FERKRPRLMS SNTTKGSGER RKAKGWGSAV RELTQAILKF GEAYEQAESS
301: KLQQVVEMEK QRMKFAKDLE LQRMQFFMKT QVEISQLKLG RKGGNPSNNH HGTTNNNNSN HNNNSGSE
101: KEVADIVSVR EDYTKAPKTD IQCKNRIDTV KKKYKSEKAK IAAGATSKWP FYDRLEQLIG PSAKIPGVGG ASGTSAAGNS NLQPQKVPLG IPVGVRGGAN
201: QFNHPHKQPQ PVPLKNQKIQ FRRRGPPVES DSEERDASSP ASSDSFPPES FERKRPRLMS SNTTKGSGER RKAKGWGSAV RELTQAILKF GEAYEQAESS
301: KLQQVVEMEK QRMKFAKDLE LQRMQFFMKT QVEISQLKLG RKGGNPSNNH HGTTNNNNSN HNNNSGSE
001: MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
Arabidopsis Description
ASIL2ASIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178V8Z7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.