Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22283 | Soybean | nucleus | 94.14 | 94.44 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 46.91 | 55.38 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 46.58 | 52.96 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 42.35 | 52.63 |
| KRH21272 | Soybean | nucleus | 51.79 | 50.96 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 41.37 | 50.4 |
| Solyc12g010890.1.1 | Tomato | nucleus | 52.77 | 50.15 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 47.56 | 49.83 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 55.05 | 48.7 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 40.07 | 48.24 |
| Bra003346.1-P | Field mustard | nucleus | 47.88 | 48.04 |
| CDX71939 | Canola | nucleus, plastid | 46.58 | 47.51 |
| CDX98311 | Canola | nucleus | 47.88 | 47.12 |
| CDX67755 | Canola | nucleus | 47.88 | 46.52 |
| AT3G58630.1 | Thale cress | nucleus | 48.53 | 46.42 |
| KRH11016 | Soybean | nucleus | 36.48 | 44.8 |
| PGSC0003DMT400020194 | Potato | plastid | 53.09 | 42.56 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 41.37 | 40.19 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 41.37 | 39.81 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 41.04 | 39.62 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 41.04 | 39.62 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 50.81 | 39.29 |
| Zm00001d011571_P001 | Maize | cytosol | 40.07 | 39.05 |
| Os05t0560600-01 | Rice | nucleus | 42.67 | 37.86 |
| EES03423 | Sorghum | cytosol | 39.09 | 37.85 |
| Zm00001d043902_P001 | Maize | nucleus | 39.09 | 37.74 |
| EES18672 | Sorghum | nucleus | 42.35 | 37.46 |
| Os01t0674000-01 | Rice | nucleus | 40.07 | 37.05 |
| Zm00001d038994_P001 | Maize | cytosol | 41.37 | 37.03 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 50.81 | 36.36 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 40.39 | 35.13 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 40.07 | 34.84 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 40.07 | 34.55 |
| Zm00001d030350_P001 | Maize | nucleus | 21.17 | 30.95 |
| KRH47662 | Soybean | nucleus, plastid | 35.5 | 29.62 |
| KRH06239 | Soybean | nucleus | 34.53 | 28.65 |
| KRH23479 | Soybean | nucleus | 26.71 | 21.35 |
| KRH09846 | Soybean | nucleus | 26.38 | 20.4 |
| KRH48419 | Soybean | nucleus | 23.13 | 19.72 |
| KRH39263 | Soybean | nucleus | 23.13 | 17.88 |
Protein Annotations
| EMBL:ACUP02007762 | EnsemblPlants:KRH27047 | EnsemblPlantsGene:GLYMA_12G210900 | EntrezGene:100784918 | InterPro:IPR006578 | InterPro:MADF-dom |
| ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF2 | PFAM:PF13837 | ProteinID:KRH27047 | ProteinID:KRH27047.1 |
| SEG:seg | SMART:SM00595 | UniParc:UPI000233CB88 | UniProt:I1LUM8 | MapMan:15.5.20 | : |
Description
hypothetical protein
Coordinates
chr12:-:36990154..36995394
Molecular Weight (calculated)
34349.4 Da
IEP (calculated)
10.423
GRAVY (calculated)
-0.878
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSIAGAPPH ADVTPPPPRP SPFPGREDCW SEEATFTLIE AWGQRHLELN RGNLRQRHWQ EVADAVNALH GHVSAKARRT DVQCKNRIDT LKKKYKIEKA
101: RVSDSGDSAT TWPFFRRLDF LIGDNFPAKK PSPPPPSSAG VTRRSTPPAK SPLWPVIPVG PRSGTKKRPA QAKPASASPD SVADSYFRRN FSVFAAAAAA
201: AAAEADSENS DGSKWSSGSE KGTMKKKRGR GDWEFGYREM AEALERFGEI YERVEEAKQR QMVELEKQRM QFAKDLETQR MKLFMETQVH LQKINRSKRS
301: SASDNVS
101: RVSDSGDSAT TWPFFRRLDF LIGDNFPAKK PSPPPPSSAG VTRRSTPPAK SPLWPVIPVG PRSGTKKRPA QAKPASASPD SVADSYFRRN FSVFAAAAAA
201: AAAEADSENS DGSKWSSGSE KGTMKKKRGR GDWEFGYREM AEALERFGEI YERVEEAKQR QMVELEKQRM QFAKDLETQR MKLFMETQVH LQKINRSKRS
301: SASDNVS
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.