CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038994_P001	Maize	cytosol	92.8	93.88
Os05t0560600-01	Rice	nucleus	80.69	80.92
TraesCS1D01G400500.1	Wheat	nucleus	74.93	73.65
TraesCS1B01G420500.1	Wheat	nucleus	75.22	73.31
TraesCS1A01G392300.1	Wheat	nucleus	74.35	73.09
EES03423	Sorghum	cytosol	57.64	63.09
GSMUA_Achr1P11500_001	Banana	nucleus	38.33	53.85
GSMUA_Achr6P26840_001	Banana	cytosol, mitochondrion, nucleus	40.35	53.85
GSMUA_Achr5P09160_001	Banana	nucleus	38.9	53.57
GSMUA_Achr9P06410_001	Banana	nucleus	41.21	52.96
GSMUA_Achr1P27460_001	Banana	nucleus	38.04	51.76
VIT_10s0003g01300.t01	Wine grape	nucleus	36.89	42.38
KRH27047	Soybean	nucleus	37.46	42.35
KRH22283	Soybean	nucleus	36.89	41.83
Solyc02g076810.2.1	Tomato	cytosol	33.72	41.64
PGSC0003DMT400026432	Potato	cytosol	34.58	41.52
Bra007407.1-P	Field mustard	nucleus, plastid	34.87	41.3
KRH21272	Soybean	nucleus	36.6	40.71
CDX71939	Canola	nucleus, plastid	34.58	39.87
Bra003346.1-P	Field mustard	nucleus	34.58	39.22
CDX98311	Canola	nucleus	34.87	38.78
CDX67755	Canola	nucleus	35.16	38.61
Solyc12g010890.1.1	Tomato	nucleus	35.45	38.08
AT3G58630.1	Thale cress	nucleus	35.16	38.01
KRH11016	Soybean	nucleus	26.8	37.2
VIT_12s0028g02150.t01	Wine grape	cytosol	32.28	32.28
PGSC0003DMT400020194	Potato	plastid	34.58	31.33
PGSC0003DMT400052607	Potato	nucleus, plastid	33.14	28.97
Solyc07g055100.2.1	Tomato	nucleus, plastid	32.85	26.57
EES12241	Sorghum	nucleus	30.26	25.74
KXG30464	Sorghum	nucleus, plastid	27.67	22.75
OQU87430	Sorghum	nucleus, plastid	19.6	19.37

Protein Annotations

EnsemblPlants:EES18672	EnsemblPlantsGene:SORBI_3009G230700	EntrezGene:8074587	ncoils:Coil	PANTHER:PTHR31307	PANTHER:PTHR31307:SF33
PFAM:PF13837	ProteinID:EES18672	ProteinID:EES18672.1	RefSeq:XP_002440242.1	SEG:seg	unigene:Sbi.10131
UniParc:UPI0001A88E38	UniProt:C5YVI3	MapMan:15.5.20	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:57072774..57076364

Molecular Weight (calculated)

37157.9 Da

IEP (calculated)

10.535

GRAVY (calculated)

-0.591

Length

347 amino acids

Sequence
(BLAST)

001: MEVREMAMAA AAAAASVGGG GGGGGGVKLP PPNPNLPYRE DCWSDGETAA LVAAWGSRYV ELNRGNLRQK QWQEVADAVN NRRGASARRR PPRTDVQCKN
101: RVDTLKKKYK AELARNAPSG WSFFPELDRL VGPTLSASAS KRPLASLPPQ FALPLHPPAV RRPPSPSPSS SSPPPPMALP LPNYRRGSPL PAAALIQKEA
201: AAAAAAVSDS EDSDDADGNN NHNSPRSPSR SLSSLSGSNK KRSRDEASSS AEKGFRELAR AIEAFAEMYE RVESAKQKHA VEMERQRIEF LKQLEVKRME
301: NFVDAHVKLA RAKRTKKTTG GAADGAGAME LVATVAALPF VSTSTFL

Best Arabidopsis Sequence Match ( AT3G14180.1 )
(BLAST)

001: MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN

Arabidopsis Description

ASIL2ASIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178V8Z7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.