Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09160_001 | Banana | nucleus | 79.61 | 80.56 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 75.29 | 77.73 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 69.8 | 65.93 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 67.06 | 65.77 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 48.63 | 41.06 |
| Solyc02g076810.2.1 | Tomato | cytosol | 45.1 | 40.93 |
| EES03423 | Sorghum | cytosol | 50.2 | 40.38 |
| KRH27047 | Soybean | nucleus | 48.24 | 40.07 |
| KRH21272 | Soybean | nucleus | 49.02 | 40.06 |
| Zm00001d011571_P001 | Maize | cytosol | 49.41 | 40.0 |
| Zm00001d043902_P001 | Maize | nucleus | 49.8 | 39.94 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 49.8 | 39.81 |
| PGSC0003DMT400026432 | Potato | cytosol | 45.1 | 39.79 |
| TraesCS3D01G271000.1 | Wheat | nucleus | 49.41 | 39.62 |
| TraesCS3A01G271400.1 | Wheat | nucleus | 49.41 | 39.62 |
| HORVU3Hr1G061870.1 | Barley | nucleus | 49.02 | 39.56 |
| KRH22283 | Soybean | nucleus | 47.45 | 39.54 |
| GSMUA_Achr9P04510_001 | Banana | nucleus | 41.18 | 39.47 |
| Os05t0560600-01 | Rice | nucleus | 53.33 | 39.31 |
| Zm00001d038994_P001 | Maize | cytosol | 52.16 | 38.78 |
| Solyc12g010890.1.1 | Tomato | nucleus | 48.63 | 38.39 |
| EES18672 | Sorghum | nucleus | 51.76 | 38.04 |
| Os01t0674000-01 | Rice | nucleus | 48.63 | 37.35 |
| Bra007407.1-P | Field mustard | nucleus, plastid | 42.75 | 37.2 |
| CDX71939 | Canola | nucleus, plastid | 43.53 | 36.88 |
| TraesCS1D01G400500.1 | Wheat | nucleus | 50.98 | 36.83 |
| Bra003346.1-P | Field mustard | nucleus | 43.92 | 36.6 |
| TraesCS1A01G392300.1 | Wheat | nucleus | 50.59 | 36.54 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 50.98 | 36.52 |
| CDX98311 | Canola | nucleus | 44.31 | 36.22 |
| CDX67755 | Canola | nucleus | 44.71 | 36.08 |
| AT3G58630.1 | Thale cress | nucleus | 44.71 | 35.51 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 47.84 | 35.16 |
| KRH11016 | Soybean | nucleus | 32.16 | 32.8 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 43.14 | 32.26 |
| PGSC0003DMT400020194 | Potato | plastid | 48.24 | 32.11 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 42.35 | 29.83 |
| PGSC0003DMT400052607 | Potato | nucleus, plastid | 45.88 | 29.47 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 43.53 | 27.48 |
| Solyc07g055100.2.1 | Tomato | nucleus, plastid | 45.88 | 27.27 |
| GSMUA_Achr8P26150_001 | Banana | nucleus | 23.53 | 17.14 |
| GSMUA_Achr8P04010_001 | Banana | nucleus | 21.96 | 16.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P27460_001 | EnsemblPlants:GSMUA_Achr1T27460_001 | EnsemblPlantsGene:GSMUA_Achr1G27460_001 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF2 |
| PFAM:PF13837 | SEG:seg | UniParc:UPI0002967B29 | UniProt:M0S3K3 | MapMan:15.5.20 | : |
Description
transcription factor like protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G27460_001]
Coordinates
chr1:-:24243350..24246173
Molecular Weight (calculated)
28614.0 Da
IEP (calculated)
10.574
GRAVY (calculated)
-0.773
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGREAAPTR PPNLAVLYRE DCWSEGETSA LVDAWGDRYI ELNRGNLRQK HWQEVADAVN SRRGAGRRPP RTDIQCKNRI DTLKKKHKVE KARIAARAES
101: QWPFFSRLDA LVGSSPAPAP AAPKKPSASL SLALPLPFHR KGSSLSAATA VGPAEPRKKQ STAAATSSSR SETGWKRGRE GEGNGIRELA RAIVRFAEIY
201: ERVEEAKQRQ MMELEEQRME FVKALELQKM EIIVDSQVQL AKIKRSRQSH TDSYL
101: QWPFFSRLDA LVGSSPAPAP AAPKKPSASL SLALPLPFHR KGSSLSAATA VGPAEPRKKQ STAAATSSSR SETGWKRGRE GEGNGIRELA RAIVRFAEIY
201: ERVEEAKQRQ MMELEEQRME FVKALELQKM EIIVDSQVQL AKIKRSRQSH TDSYL
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.