Factsheet for GSMUA_Achr8P04010_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26150_001	Banana	nucleus	58.45	58.29
VIT_09s0002g04700.t01	Wine grape	nucleus	46.99	38.86
Solyc12g043090.1.1	Tomato	nucleus	40.4	37.6
PGSC0003DMT400080593	Potato	nucleus	40.11	37.43
VIT_11s0016g04130.t01	Wine grape	nucleus	38.97	37.16
KRH48419	Soybean	nucleus	36.68	35.56
KRH23479	Soybean	nucleus	38.68	35.16
Bra001951.1-P	Field mustard	nucleus	33.52	34.51
KRH09846	Soybean	nucleus	39.26	34.51
AT3G24490.1	Thale cress	nucleus	32.66	34.23
CDX94808	Canola	nucleus	31.23	33.96
CDX93016	Canola	nucleus	19.2	33.84
KRH39263	Soybean	nucleus	36.96	32.49
PGSC0003DMT400070593	Potato	nucleus	32.38	32.1
Solyc05g018350.2.1	Tomato	nucleus	32.09	31.73
Os01t0718900-01	Rice	nucleus	29.23	31.68
TraesCS3B01G274700.1	Wheat	nucleus, plastid	27.51	30.77
TraesCS3D01G246100.1	Wheat	nucleus, plastid	27.51	30.38
TraesCS3A01G245400.1	Wheat	nucleus, plastid	26.93	29.94
OQU87430	Sorghum	nucleus, plastid	27.79	27.64
Zm00001d011730_P001	Maize	nucleus, plastid	26.07	26.0
GSMUA_Achr5P09160_001	Banana	nucleus	17.19	23.81
GSMUA_Achr9P04510_001	Banana	nucleus	18.05	23.68
GSMUA_Achr1P11500_001	Banana	nucleus	16.33	23.08
GSMUA_Achr1P27460_001	Banana	nucleus	16.05	21.96
GSMUA_Achr6P26840_001	Banana	cytosol, mitochondrion, nucleus	15.76	21.15
GSMUA_Achr9P06410_001	Banana	nucleus	16.33	21.11
GSMUA_Achr8P23650_001	Banana	nucleus	16.33	16.72
GSMUA_Achr9P14340_001	Banana	nucleus	16.33	15.75
GSMUA_Achr3P05880_001	Banana	nucleus	16.05	13.86

Protein Annotations

EnsemblPlants:GSMUA_Achr8P04010_001	EnsemblPlants:GSMUA_Achr8T04010_001	EnsemblPlantsGene:GSMUA_Achr8G04010_001	ncoils:Coil	PANTHER:PTHR31307	PANTHER:PTHR31307:SF6
PFAM:PF13837	SEG:seg	UniParc:UPI000295BC64	UniProt:M0TMF4	MapMan:15.5.20	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04010_001]

Coordinates

chr8:+:2745341..2749015

Molecular Weight (calculated)

39981.7 Da

IEP (calculated)

4.182

GRAVY (calculated)

-1.402

Length

349 amino acids

Sequence
(BLAST)

001: MDDSEDDARY PPNLHPPKPR HYFPSSSSAP RPKTRFRNPP PPPHFGRGYD DATDDDEEEE AEEEEQNYMD QPVDDDEDDD GDGHRRTRNY GDDDDDDDSS
101: SESRGKRRRI DKLALGFEFA PRLRAAAPPK PLARTSPPDW SEDSTFVLLD AWGDRYLQNG RKSLRSDEWN EVAKKVSQAS KVVRSDAQCR NRYVFASSSV
201: YRNGYSGNNE MKDSPGDSGT EDDGDEENDS DGLPPQRENI CSDSSFKMLA ESIQKFGEVY EKMENHKRQQ MAELERMRKE FQRDLEVQKR QILERVQEEI
301: AKLREEQVEE DDDEDLEDRD EDNNDGDDGG SAENLSGIIS ASIYLTAFV

Best Arabidopsis Sequence Match ( AT3G24490.1 )
(BLAST)

001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE

Arabidopsis Description

Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.