Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g043090.1.1 | Tomato | nucleus | 61.37 | 69.07 |
| PGSC0003DMT400080593 | Potato | nucleus | 61.14 | 68.98 |
| VIT_11s0016g04130.t01 | Wine grape | nucleus | 55.69 | 64.21 |
| KRH23479 | Soybean | nucleus | 55.21 | 60.68 |
| KRH09846 | Soybean | nucleus | 54.98 | 58.44 |
| GSMUA_Achr8P04010_001 | Banana | nucleus | 38.86 | 46.99 |
| GSMUA_Achr8P26150_001 | Banana | nucleus | 36.26 | 43.71 |
| Os01t0718900-01 | Rice | nucleus | 27.73 | 36.34 |
| TraesCS3B01G274700.1 | Wheat | nucleus, plastid | 24.88 | 33.65 |
| TraesCS3A01G245400.1 | Wheat | nucleus, plastid | 24.64 | 33.12 |
| TraesCS3D01G246100.1 | Wheat | nucleus, plastid | 24.41 | 32.59 |
| VIT_08s0058g00200.t01 | Wine grape | nucleus | 18.25 | 30.32 |
| OQU87430 | Sorghum | nucleus, plastid | 25.12 | 30.2 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 23.7 | 28.57 |
| VIT_10s0003g01300.t01 | Wine grape | nucleus | 19.67 | 27.48 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 20.85 | 24.18 |
| VIT_12s0028g02150.t01 | Wine grape | cytosol | 19.19 | 23.34 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100244623 | wikigene:100244623 | MapMan:15.5.20 | ProteinID:CCB59485 | ProteinID:CCB59485.1 |
| ncoils:Coil | UniProt:F6HX15 | EMBL:FN596494 | InterPro:IPR017877 | EntrezGene:LOC100244623 | wikigene:LOC100244623 |
| InterPro:Myb-like_dom | PFAM:PF13837 | PFscan:PS50090 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF6 | UniParc:UPI0002109CB5 |
| ArrayExpress:VIT_09s0002g04700 | EnsemblPlantsGene:VIT_09s0002g04700 | EnsemblPlants:VIT_09s0002g04700.t01 | RefSeq:XP_002279835 | RefSeq:XP_002279835.1 | SEG:seg |
Description
No Description!
Coordinates
chr9:-:4255379..4258444
Molecular Weight (calculated)
48638.3 Da
IEP (calculated)
4.528
GRAVY (calculated)
-1.367
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDTEDDARY PPNPYGVNHP QGYGSSHRPK LPVRNTSYQR RIGNQYVDED VEDEDDEEDE EELGHEEDED VDQNNALGQV SKEEEDDDDD DEDDNNDNDN
101: DEDEDHDNQK DHTRRVEDVS LERHQKKRKL KSLISSYEFA PRVAVPSAVA APAPKPSFGG RNSLTDWTEH ETFVLLDAWG DRFLKLGRKS LRSEEWQEVA
201: EKVSRESRTE RTDTQCRNRL DTLKKKYKKE NMKSGETGGG TNKWVYFKKM DMLMSAAPRQ AGLSCGLDSG EYVFMNPRVY LNRPNGLDEM RDSPGNSGSS
301: GGEEDDSDGL PPKRKSCGQD NNEGSSFRLL ANSIQKFSEI YEKIENSKRQ QMVELEKMRM DFHRDLELQK RQIVERAQAE IAKIRQGDDE ETEVSTENVS
401: GQKRIYWKCL KRTQQGTHDT YN
101: DEDEDHDNQK DHTRRVEDVS LERHQKKRKL KSLISSYEFA PRVAVPSAVA APAPKPSFGG RNSLTDWTEH ETFVLLDAWG DRFLKLGRKS LRSEEWQEVA
201: EKVSRESRTE RTDTQCRNRL DTLKKKYKKE NMKSGETGGG TNKWVYFKKM DMLMSAAPRQ AGLSCGLDSG EYVFMNPRVY LNRPNGLDEM RDSPGNSGSS
301: GGEEDDSDGL PPKRKSCGQD NNEGSSFRLL ANSIQKFSEI YEKIENSKRQ QMVELEKMRM DFHRDLELQK RQIVERAQAE IAKIRQGDDE ETEVSTENVS
401: GQKRIYWKCL KRTQQGTHDT YN
001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.