Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P04010_001 | Banana | nucleus | 58.29 | 58.45 |
| VIT_11s0016g04130.t01 | Wine grape | nucleus | 40.57 | 38.8 |
| CDX93016 | Canola | nucleus | 20.86 | 36.87 |
| KRH48419 | Soybean | nucleus | 37.71 | 36.67 |
| VIT_09s0002g04700.t01 | Wine grape | nucleus | 43.71 | 36.26 |
| PGSC0003DMT400080593 | Potato | nucleus | 38.0 | 35.56 |
| Solyc12g043090.1.1 | Tomato | nucleus | 37.71 | 35.2 |
| KRH23479 | Soybean | nucleus | 37.43 | 34.11 |
| Os01t0718900-01 | Rice | nucleus | 30.57 | 33.23 |
| KRH39263 | Soybean | nucleus | 37.43 | 33.0 |
| KRH09846 | Soybean | nucleus | 37.14 | 32.75 |
| TraesCS3B01G274700.1 | Wheat | nucleus, plastid | 28.57 | 32.05 |
| TraesCS3A01G245400.1 | Wheat | nucleus, plastid | 28.29 | 31.53 |
| AT3G24490.1 | Thale cress | nucleus | 29.71 | 31.23 |
| Solyc05g018350.2.1 | Tomato | nucleus | 31.43 | 31.16 |
| CDX94808 | Canola | nucleus | 28.57 | 31.15 |
| TraesCS3D01G246100.1 | Wheat | nucleus, plastid | 28.0 | 31.01 |
| Bra001951.1-P | Field mustard | nucleus | 30.0 | 30.97 |
| PGSC0003DMT400070593 | Potato | nucleus | 31.14 | 30.97 |
| OQU87430 | Sorghum | nucleus, plastid | 28.57 | 28.49 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 27.14 | 27.14 |
| GSMUA_Achr1P11500_001 | Banana | nucleus | 18.29 | 25.91 |
| GSMUA_Achr5P09160_001 | Banana | nucleus | 18.29 | 25.4 |
| GSMUA_Achr1P27460_001 | Banana | nucleus | 17.14 | 23.53 |
| GSMUA_Achr6P26840_001 | Banana | cytosol, mitochondrion, nucleus | 17.14 | 23.08 |
| GSMUA_Achr9P06410_001 | Banana | nucleus | 17.43 | 22.59 |
| GSMUA_Achr9P04510_001 | Banana | nucleus | 17.14 | 22.56 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 15.71 | 16.13 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 16.29 | 15.75 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 17.71 | 15.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P26150_001 | EnsemblPlants:GSMUA_Achr8T26150_001 | EnsemblPlantsGene:GSMUA_Achr8G26150_001 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF6 |
| SEG:seg | UniParc:UPI000295592A | UniProt:M0TTR8 | MapMan:15.5.20 | : | : |
Description
transcription factor like protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26150_001]
Coordinates
chr8:+:29805256..29808602
Molecular Weight (calculated)
40105.6 Da
IEP (calculated)
4.537
GRAVY (calculated)
-1.280
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDARFPPHR RSKAPFRDLP PRSPFGRRYA DDDEDEEGEE EEDNEEEHND MHQPMDDDYD DDSSSESRGK RKRIDELALG FEFAPRVNPE ASAPSSKPAA
101: RTSTFDLLDP WGDRFAQNGR RSFRADEGSD IAKKVSLASK ANRTNAYRGN RFEKYKKEKP STGEDGNVGS KWVYFKKMDA LMSSPSPLPG RQQPHLFSSS
201: SVYQNRCSGN HEKRDGLGNT RYDGDCDDED VDSDGLPPKR MNVLRCSDSS FRMLAESIQK FGDIYEKMEI HQRQQMAELE RMRKEFQRDL EVQKRQILEK
301: AQEEIAKLTE EGRGDDEEDR EDKEEDSDDG DSADNLSGFV SASFFLTAFV
101: RTSTFDLLDP WGDRFAQNGR RSFRADEGSD IAKKVSLASK ANRTNAYRGN RFEKYKKEKP STGEDGNVGS KWVYFKKMDA LMSSPSPLPG RQQPHLFSSS
201: SVYQNRCSGN HEKRDGLGNT RYDGDCDDED VDSDGLPPKR MNVLRCSDSS FRMLAESIQK FGDIYEKMEI HQRQQMAELE RMRKEFQRDL EVQKRQILEK
301: AQEEIAKLTE EGRGDDEEDR EDKEEDSDDG DSADNLSGFV SASFFLTAFV
001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE
Arabidopsis Description
Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.