Factsheet for Os01t0718900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
cytosol 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G274700.1	Wheat	nucleus, plastid	64.91	66.99
TraesCS3D01G246100.1	Wheat	nucleus, plastid	64.29	65.51
TraesCS3A01G245400.1	Wheat	nucleus, plastid	63.35	64.97
OQU87430	Sorghum	nucleus, plastid	59.94	54.99
Zm00001d011730_P001	Maize	nucleus, plastid	59.32	54.57
Solyc12g043090.1.1	Tomato	nucleus	36.65	31.47
PGSC0003DMT400080593	Potato	nucleus	36.34	31.28
CDX93016	Canola	nucleus	18.94	30.81
GSMUA_Achr8P26150_001	Banana	nucleus	33.23	30.57
VIT_11s0016g04130.t01	Wine grape	nucleus	33.85	29.78
GSMUA_Achr8P04010_001	Banana	nucleus	31.68	29.23
AT3G24490.1	Thale cress	nucleus	30.12	29.13
PGSC0003DMT400070593	Potato	nucleus	30.43	27.84
Solyc05g018350.2.1	Tomato	nucleus	30.43	27.76
VIT_09s0002g04700.t01	Wine grape	nucleus	36.34	27.73
KRH48419	Soybean	nucleus	30.75	27.5
CDX94808	Canola	nucleus	27.02	27.1
KRH23479	Soybean	nucleus	32.3	27.08
Bra001951.1-P	Field mustard	nucleus	27.95	26.55
KRH09846	Soybean	nucleus	32.3	26.2
KRH39263	Soybean	nucleus	30.75	24.94
Os05t0560600-01	Rice	nucleus	22.36	20.81
Os04t0445600-00	Rice	nucleus	26.71	20.62
Os02t0565000-01	Rice	nucleus	24.84	19.09
Os01t0674000-01	Rice	nucleus	19.57	18.98

Protein Annotations

EnsemblPlants:Os01t0718900-01	EnsemblPlantsGene:Os01g0718900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0043565	ncoils:Coil	PANTHER:PTHR31307	PANTHER:PTHR31307:SF6	PFAM:PF13837	ProteinID:BAS74055.1
SEG:seg	UniParc:UPI0001C7E9A4	UniProt:A0A0P0V7G6	MapMan:15.5.20	:	:

Description

MADF domain domain containing protein. (Os01t0718900-01)

Coordinates

chr1:-:29951353..29952644

Molecular Weight (calculated)

35765.5 Da

IEP (calculated)

5.278

GRAVY (calculated)

-1.001

Length

322 amino acids

Sequence
(BLAST)

001: MDDGAAPAAA AAAELPSPSP SSSGTSPSPR SKRRRTDRYA QGFEFAPRPA PATATATAPA PTPARGTPEW SEGSTFALLD AWGDRFVRAG RRSLRADEWL
101: EVSRLAAAAA SRPPGYYSEQ QCRNRIDTLR KKYRKEKERM RLAARRPDRP DRPSPSKWIY FDKMQSLMCP PPLPLQPPVV TRRRDTQPVP RQSWGLDAAE
201: YVLGGCENAG TRDSGSGAEL GEEQPNEAGA GKGEDFELLV ESIRKLGDVY ERVESSKRQH MAEVEWLRRD LQRDLEVRRR EILEKAQAEI ARLTEEDGEE
301: GDLKEGEGDD NKRFGDDGGG EE

Best Arabidopsis Sequence Match ( AT3G24490.1 )
(BLAST)

001: MGDSEDETGY PKKFYSLNRQ NHPMYSRPIP KRHAYYNEEE DEDEVEGEEE DPQGGYIRGN ERFQKRQKPN KVVSGFEFAG PSDAKVAYDW REQEAFVLLE
101: VWGDRFLQLG RRSLRNEDWN EVAEKVSEEL RMEKSETQCR RMIDDLKRKY RKEKIKVEKS GLGSSKWSFF NKLDMLLCVS PKSDLGLACG VDSGEFVFMN
201: TKVYLDKSNG FDEMMDSPGD SEEEEDEDDE VEYERKKVND AASYKMLADS VERFGKVYEK MEKSKKEQMK ELEKMRADFQ RDLELQKKQI VDRAQSEIAR
301: LREEEENHHG GGDDDESEDE EMENDSDVNL SDE

Arabidopsis Description

Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9LV59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.