Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G311800.1 | Wheat | nucleus, plastid | 72.66 | 73.37 |
| TraesCS2A01G313300.1 | Wheat | nucleus, plastid | 72.66 | 72.84 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 72.66 | 72.84 |
| EES12241 | Sorghum | nucleus | 69.54 | 71.08 |
| Zm00001d025514_P001 | Maize | nucleus | 66.43 | 70.66 |
| HORVU2Hr1G077940.1 | Barley | cytosol, nucleus, plastid | 37.89 | 70.54 |
| Zm00001d003549_P001 | Maize | nucleus | 62.59 | 67.79 |
| Os02t0565000-01 | Rice | nucleus | 57.79 | 57.52 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 33.09 | 40.47 |
| KRH06239 | Soybean | nucleus | 35.49 | 40.0 |
| KRH47662 | Soybean | nucleus, plastid | 35.25 | 39.95 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 34.29 | 39.29 |
| CDY33246 | Canola | nucleus | 28.78 | 39.22 |
| CDY39099 | Canola | nucleus | 29.5 | 38.8 |
| CDY39101 | Canola | nucleus, plastid | 27.82 | 38.03 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 28.06 | 37.74 |
| Bra021536.1-P | Field mustard | nucleus | 27.58 | 37.58 |
| Solyc03g122030.1.1 | Tomato | nucleus | 32.37 | 37.19 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 32.13 | 37.02 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 32.61 | 36.46 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 34.29 | 35.4 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 25.42 | 35.22 |
| CDY61477 | Canola | nucleus, plastid | 25.18 | 34.88 |
| CDY02487 | Canola | nucleus, plastid | 25.66 | 34.74 |
| CDX75751 | Canola | nucleus | 30.94 | 34.68 |
| CDY08216 | Canola | nucleus | 25.9 | 32.93 |
| Bra014370.1-P | Field mustard | nucleus | 26.14 | 32.54 |
| AT3G14180.1 | Thale cress | nucleus | 34.29 | 32.28 |
| Os01t0674000-01 | Rice | nucleus | 25.18 | 31.63 |
| Os05t0560600-01 | Rice | nucleus | 26.14 | 31.5 |
| CDY51405 | Canola | nucleus | 9.11 | 29.92 |
| CDY26148 | Canola | nucleus, plastid | 25.42 | 29.69 |
| AT1G54060.1 | Thale cress | nucleus | 26.86 | 29.24 |
| Os01t0718900-01 | Rice | nucleus | 20.62 | 26.71 |
| Bra030909.1-P | Field mustard | nucleus | 8.15 | 26.56 |
| CDY33093 | Canola | cytosol, plastid | 26.14 | 24.94 |
Protein Annotations
| EnsemblPlants:Os04t0445600-00 | EnsemblPlantsGene:Os04g0445600 | EntrezGene:4335961 | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 | PFAM:PF13837 |
| ProteinID:BAF14817.1 | ProteinID:BAS89391.1 | ProteinID:CAE02443.2 | RefSeq:XP_015633896.1 | SEG:seg | UniParc:UPI00001B1284 |
| UniProt:Q7XRK9 | MapMan:15.5.20 | : | : | : | : |
Description
Homeodomain-like containing protein. (Os04t0445600-00)
Coordinates
chr4:+:22212579..22214401
Molecular Weight (calculated)
43928.6 Da
IEP (calculated)
7.039
GRAVY (calculated)
-0.791
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDDAAASA SPSPSPSPVA SALPVADPVT VAAGPPSGLL ALALPIQKQQ HAASPNPGGG GGGREDAWSE GATAALIDAW GERFVALGRG SLRHPQWQEV
101: ADAVSSREGY AKAPKSDVQC KNRIDTLKKK YKIERAKPAS SWQFFGRLDD LLAPTFNQKP GGNGGGGVGA SVNGRNPVPA ALRVGFPQRS RTPLMPAPVS
201: AVKRRAPSPE PSASSESSDG FPPERQPAFP PLPLPPPPNG KRSRADEGRG GGAGGGGDRA QGLRELAQAI RRFGEAYERV ETAKLEQSAE MERRRLDFAS
301: ELESQRVQFF LNTQMELSQV KDHSSSPANA AAPPGATGGA GGTSRRMASV NDASASGNYH RRYRVSDGGR HRHHPQPPPS RPHYQYHENN IAVAAAAAAS
401: DGEQSSDEED DEEEESQ
101: ADAVSSREGY AKAPKSDVQC KNRIDTLKKK YKIERAKPAS SWQFFGRLDD LLAPTFNQKP GGNGGGGVGA SVNGRNPVPA ALRVGFPQRS RTPLMPAPVS
201: AVKRRAPSPE PSASSESSDG FPPERQPAFP PLPLPPPPNG KRSRADEGRG GGAGGGGDRA QGLRELAQAI RRFGEAYERV ETAKLEQSAE MERRRLDFAS
301: ELESQRVQFF LNTQMELSQV KDHSSSPANA AAPPGATGGA GGTSRRMASV NDASASGNYH RRYRVSDGGR HRHHPQPPPS RPHYQYHENN IAVAAAAAAS
401: DGEQSSDEED DEEEESQ
001: MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
Arabidopsis Description
ASIL2ASIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178V8Z7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.