Factsheet for Os03t0626200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93786	Sorghum	mitochondrion	80.36	80.36
HORVU4Hr1G011750.1	Barley	cytosol, mitochondrion	75.0	75.0
TraesCS4A01G244400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	67.86	67.86
TraesCS4B01G070600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	67.86	67.86
TraesCS4D01G069400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	67.86	67.86
GSMUA_Achr9P09740_001	Banana	mitochondrion	53.57	55.56
KRH24531	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	46.43	48.15
KRH29535	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plastid	46.43	48.15
PGSC0003DMT400064778	Potato	cytosol, extracellular, golgi, mitochondrion	44.64	46.3
Solyc01g109220.2.1	Tomato	cytosol, extracellular, golgi, mitochondrion	44.64	46.3
AT1G49410.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	42.86	44.44
Zm00001d033301_P001	Maize	mitochondrion	75.0	44.21
KRH06979	Soybean	mitochondrion	39.29	44.0
Bra014187.1-P	Field mustard	cytosol	41.07	42.59
VIT_03s0063g01900.t01	Wine grape	cytosol	41.07	42.59
KRH25119	Soybean	mitochondrion	44.64	33.33

Protein Annotations

EnsemblPlants:Os03t0626200-01	EnsemblPlantsGene:Os03g0626200	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005742	GO:GO:0016020	GO:GO:0016021	InterPro:TOM6_plants	ncoils:Coil
PANTHER:PTHR35999	ProteinID:BAS85345.1	ProteinID:EEE59531.1	TMHMM:TMhelix	UniParc:UPI0000E1215E	UniProt:B9F9T3
MapMan:23.2.1.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os03t0626200-01)

Coordinates

chr3:+:23841765..23844369

Molecular Weight (calculated)

6380.0 Da

IEP (calculated)

9.941

GRAVY (calculated)

0.259

Length

56 amino acids

Sequence
(BLAST)

1: MFLGAIPRRP SKEVAYKQLR SHLIVMASCV AAIRAAPYIL HFLNRDADRL ELTLEL

Best Arabidopsis Sequence Match ( AT1G49410.1 )
(BLAST)

1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF

Arabidopsis Description

TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.