Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G49410.1 | Thale cress | cytosol, mitochondrion, peroxisome, plastid | 85.19 | 85.19 |
| PGSC0003DMT400064778 | Potato | cytosol, extracellular, golgi, mitochondrion | 74.07 | 74.07 |
| Solyc01g109220.2.1 | Tomato | cytosol, extracellular, golgi, mitochondrion | 74.07 | 74.07 |
| VIT_03s0063g01900.t01 | Wine grape | cytosol | 74.07 | 74.07 |
| KRH29535 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plastid | 66.67 | 66.67 |
| KRH06979 | Soybean | mitochondrion | 61.11 | 66.0 |
| KRH24531 | Soybean | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 64.81 | 64.81 |
| GSMUA_Achr9P09740_001 | Banana | mitochondrion | 50.0 | 50.0 |
| KRH25119 | Soybean | mitochondrion | 62.96 | 45.33 |
| HORVU4Hr1G011750.1 | Barley | cytosol, mitochondrion | 42.59 | 41.07 |
| Os03t0626200-01 | Rice | mitochondrion | 42.59 | 41.07 |
| TraesCS4A01G244400.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 42.59 | 41.07 |
| TraesCS4B01G070600.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 42.59 | 41.07 |
| TraesCS4D01G069400.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 42.59 | 41.07 |
| EER93786 | Sorghum | mitochondrion | 38.89 | 37.5 |
| Zm00001d033301_P001 | Maize | mitochondrion | 40.74 | 23.16 |
Protein Annotations
| EnsemblPlants:Bra014187.1 | EnsemblPlants:Bra014187.1-P | EnsemblPlantsGene:Bra014187 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005742 | GO:GO:0016020 | GO:GO:0016021 | InterPro:TOM6_plants |
| PANTHER:PTHR35999 | TMHMM:TMhelix | UniParc:UPI000254636F | UniProt:M4DCH3 | MapMan:23.2.1.2 | : |
Description
AT1G49410 (E=2e-021) TOM6 | TOM6 (translocase of the outer mitochondrial membrane 6)
Coordinates
chrA08:+:2707491..2707655
Molecular Weight (calculated)
6168.6 Da
IEP (calculated)
9.063
GRAVY (calculated)
0.244
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MFSGMFMEKP DKAVALKQLR THVALFGGWV VAIRAVPYVL SYFSDSKEEL KLDF
1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF
Arabidopsis Description
TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.