CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0626200-01	Rice	mitochondrion	80.36	80.36
HORVU4Hr1G011750.1	Barley	cytosol, mitochondrion	78.57	78.57
TraesCS4A01G244400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.79	76.79
TraesCS4B01G070600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.79	76.79
TraesCS4D01G069400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.79	76.79
GSMUA_Achr9P09740_001	Banana	mitochondrion	57.14	59.26
KRH24531	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	50.0	51.85
KRH29535	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plastid	50.0	51.85
PGSC0003DMT400064778	Potato	cytosol, extracellular, golgi, mitochondrion	50.0	51.85
Solyc01g109220.2.1	Tomato	cytosol, extracellular, golgi, mitochondrion	50.0	51.85
Zm00001d033301_P001	Maize	mitochondrion	85.71	50.53
KRH06979	Soybean	mitochondrion	42.86	48.0
AT1G49410.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	42.86	44.44
VIT_03s0063g01900.t01	Wine grape	cytosol	42.86	44.44
Bra014187.1-P	Field mustard	cytosol	37.5	38.89
KRH25119	Soybean	mitochondrion	50.0	37.33

Protein Annotations

EnsemblPlants:EER93786	EnsemblPlantsGene:SORBI_3001G162800	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005742	GO:GO:0016020	GO:GO:0016021	InterPro:TOM6_plants	PANTHER:PTHR35999
ProteinID:EER93786	ProteinID:EER93786.1	RefSeq:XP_002466788.1	TMHMM:TMhelix	unigene:Sbi.18396	UniParc:UPI0001A82BE6
UniProt:C5WS66	MapMan:23.2.1.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:13420525..13423996

Molecular Weight (calculated)

6295.9 Da

IEP (calculated)

9.882

GRAVY (calculated)

0.189

Length

56 amino acids

Sequence
(BLAST)

1: MFLGAVPRRP SKEAAYKQLR SHLVIMASCA AVIRAAPYIL HFLTRDGDVQ ELKLEL

Best Arabidopsis Sequence Match ( AT1G49410.1 )
(BLAST)

1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF

Arabidopsis Description

TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.