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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
plastid: 23198870
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93786 Sorghum mitochondrion 50.53 85.71
Os03t0626200-01 Rice mitochondrion 44.21 75.0
HORVU4Hr1G011750.1 Barley cytosol, mitochondrion 41.05 69.64
TraesCS4A01G244400.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 40.0 67.86
TraesCS4B01G070600.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 40.0 67.86
TraesCS4D01G069400.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 40.0 67.86
GSMUA_Achr9P09740_001 Banana mitochondrion 32.63 57.41
KRH06979 Soybean mitochondrion 27.37 52.0
KRH24531 Soybean cytosol, endoplasmic reticulum, extracellular, mitochondrion 29.47 51.85
KRH29535 Soybean endoplasmic reticulum, extracellular, mitochondrion, plastid 29.47 51.85
PGSC0003DMT400064778 Potato cytosol, extracellular, golgi, mitochondrion 26.32 46.3
Solyc01g109220.2.1 Tomato cytosol, extracellular, golgi, mitochondrion 26.32 46.3
VIT_03s0063g01900.t01 Wine grape cytosol 26.32 46.3
AT1G49410.1 Thale cress cytosol, mitochondrion, peroxisome, plastid 25.26 44.44
Bra014187.1-P Field mustard cytosol 23.16 40.74
KRH25119 Soybean mitochondrion 30.53 38.67
Protein Annotations
EnsemblPlants:Zm00001d033301_P001EnsemblPlants:Zm00001d033301_T001EnsemblPlantsGene:Zm00001d033301GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005742GO:GO:0016020GO:GO:0016021InterPro:TOM6_plants
PANTHER:PTHR35999ProteinID:ONM07183.1UniParc:UPI0008450395UniProt:A0A1D6KXK5MapMan:23.2.1.2:
Description
No Description!
Coordinates
chr1:-:258066503..258070037
Molecular Weight (calculated)
10396.0 Da
IEP (calculated)
9.096
GRAVY (calculated)
0.347
Length
95 amino acids
Sequence
(BLAST)
1: MFLGSLPRRP SKEAAYKQLR SHIIIMASCA AVIRATPYIL HFLARDGDIQ ELKLDLFTVA CHSRLMSMCC ACATKATVSS RPLQGTMELV ATVPA
Best Arabidopsis Sequence Match ( AT1G49410.1 )
(BLAST)
1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF
Arabidopsis Description
TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.