CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29535	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plastid	66.67	92.59
KRH24531	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	62.67	87.04
KRH06979	Soybean	mitochondrion	57.33	86.0
PGSC0003DMT400064778	Potato	cytosol, extracellular, golgi, mitochondrion	54.67	75.93
Solyc01g109220.2.1	Tomato	cytosol, extracellular, golgi, mitochondrion	54.67	75.93
VIT_03s0063g01900.t01	Wine grape	cytosol	50.67	70.37
GSMUA_Achr9P09740_001	Banana	mitochondrion	46.67	64.81
AT1G49410.1	Thale cress	cytosol, mitochondrion, peroxisome, plastid	45.33	62.96
Bra014187.1-P	Field mustard	cytosol	45.33	62.96
EER93786	Sorghum	mitochondrion	37.33	50.0
HORVU4Hr1G011750.1	Barley	cytosol, mitochondrion	36.0	48.21
TraesCS4A01G244400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.67	46.43
TraesCS4B01G070600.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.67	46.43
TraesCS4D01G069400.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.67	46.43
Os03t0626200-01	Rice	mitochondrion	33.33	44.64
Zm00001d033301_P001	Maize	mitochondrion	38.67	30.53

Protein Annotations

EMBL:ACUP02007207	EnsemblPlants:KRH25119	EnsemblPlantsGene:GLYMA_12G082000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005742	GO:GO:0016020	InterPro:TOM6_plants	PANTHER:PTHR35999
ProteinID:KRH25119	ProteinID:KRH25119.1	SEG:seg	UniParc:UPI000296C3C8	UniProt:K7LTQ1	MapMan:23.2.1.2

Description

hypothetical protein

Coordinates

chr12:-:6491205..6491574

Molecular Weight (calculated)

8795.3 Da

IEP (calculated)

10.143

GRAVY (calculated)

0.239

Length

75 amino acids

Sequence
(BLAST)

1: MFPGMFMRKP DKAAALKQLK SHVVMFQAWV VVIQVTPYVL HFLSTEKEEL KLELYLLTLP RQSKIKMLMG EYLLP

Best Arabidopsis Sequence Match ( AT1G49410.1 )
(BLAST)

1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF

Arabidopsis Description

TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.