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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, extracellular, cytosol

Predictor Summary:
  • plastid 1
  • extracellular 1
  • mitochondrion 3
  • cytosol 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g109220.2.1 Tomato cytosol, extracellular, golgi, mitochondrion 100.0 100.0
VIT_03s0063g01900.t01 Wine grape cytosol 79.63 79.63
AT1G49410.1 Thale cress cytosol, mitochondrion, peroxisome, plastid 75.93 75.93
KRH24531 Soybean cytosol, endoplasmic reticulum, extracellular, mitochondrion 75.93 75.93
KRH29535 Soybean endoplasmic reticulum, extracellular, mitochondrion, plastid 75.93 75.93
Bra014187.1-P Field mustard cytosol 74.07 74.07
KRH06979 Soybean mitochondrion 64.81 70.0
GSMUA_Achr9P09740_001 Banana mitochondrion 61.11 61.11
KRH25119 Soybean mitochondrion 75.93 54.67
EER93786 Sorghum mitochondrion 51.85 50.0
TraesCS4A01G244400.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 51.85 50.0
TraesCS4B01G070600.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 51.85 50.0
TraesCS4D01G069400.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, nucleus 51.85 50.0
HORVU4Hr1G011750.1 Barley cytosol, mitochondrion 48.15 46.43
Os03t0626200-01 Rice mitochondrion 46.3 44.64
Zm00001d033301_P001 Maize mitochondrion 46.3 26.32
Protein Annotations
EnsemblPlants:PGSC0003DMT400064778EnsemblPlantsGene:PGSC0003DMG400025161EntrezGene:102590635GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005742GO:GO:0016020GO:GO:0016021InterPro:TOM6_plants
PANTHER:PTHR35999PGSC:PGSC0003DMG400025161RefSeq:XP_006365492.1TMHMM:TMhelixUniParc:UPI0002768801UniProt:M1CCW5
MapMan:23.2.1.2:::::
Description
Mitochondrial import receptor subunit TOM6 homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400025161]
Coordinates
chr1:+:85515670..85523049
Molecular Weight (calculated)
6341.0 Da
IEP (calculated)
10.108
GRAVY (calculated)
0.128
Length
54 amino acids
Sequence
(BLAST)
1: MFPGMFMRKP DKAAALKQLK THVVLFGTWV AVIRVAPYIL HYFSDQKEEL KLEF
Best Arabidopsis Sequence Match ( AT1G49410.1 )
(BLAST)
1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF
Arabidopsis Description
TOM6Mitochondrial import receptor subunit TOM6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA7]
SUBAcon: [mitochondrion,peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.