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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000622.1-P
Bra001302.1-P
Bra003473.1-P
Bra004190.1-P
Bra005022.1-P
Bra005553.1-P
Bra005749.1-P
Bra008624.1-P
Bra009560.1-P
Bra010051.1-P
Bra011329.1-P
Bra011460.1-P
Bra012670.1-P
Bra013976.1-P
Bra014187.1-P
Bra014421.1-P
Bra015090.1-P
Bra017058.1-P
Bra018237.1-P
Bra023619.1-P
Bra025379.1-P
Bra025492.1-P
Bra026241.1-P
Bra027911.1-P
Bra029780.1-P
Bra033088.1-P
Bra034075.1-P
Bra037927.1-P
Bra038147.1-P
Bra039964.1-P
Bra040630.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54060.1 Bra014187.1-P AT1G49410.1 21798944
AT1G54060.1 Bra027911.1-P AT1G57620.1 21798944
AT1G54060.1 Bra038147.1-P AT1G57620.1 21798944
AT1G54060.1 Bra004190.1-P AT1G66820.1 21798944
AT1G54060.1 Bra040630.1-P AT1G66820.1 21798944
AT1G54060.1 Bra039964.1-P AT2G29125.1 21798944
AT1G54060.1 Bra018237.1-P AT2G31490.1 21798944
AT1G54060.1 Bra005553.1-P AT2G32840.1 21798944
AT1G54060.1 Bra005022.1-P AT2G39705.1 21798944
AT1G54060.1 Bra017058.1-P AT2G39705.1 21798944
AT1G54060.1 Bra001302.1-P AT3G09630.1 21798944
AT1G54060.1 Bra029780.1-P AT3G09630.1 21798944
AT1G54060.1 Bra034075.1-P AT3G09630.1 21798944
AT1G54060.1 Bra015090.1-P AT3G24860.1 21798944
AT1G54060.1 Bra025379.1-P AT3G29160.1 21798944
AT1G54060.1 Bra033088.1-P AT3G29160.1 21798944
AT1G54060.1 Bra003473.1-P AT3G61790.1 21798944
AT1G54060.1 Bra014421.1-P AT3G61790.1 21798944
AT1G54060.1 Bra012670.1-P AT4G17270.1 21798944
AT1G54060.1 Bra026241.1-P AT4G17270.1 21798944
AT1G54060.1 Bra011329.1-P AT4G32260.1 21798944
AT1G54060.1 Bra011460.1-P AT4G33666.1 21798944
AT1G54060.1 Bra005749.1-P AT5G02870.1 21798944
AT1G54060.1 Bra009560.1-P AT5G02870.1 21798944
AT1G54060.1 Bra008624.1-P AT5G16320.1 21798944
AT1G54060.1 Bra013976.1-P AT5G17450.1 21798944
AT1G54060.1 Bra023619.1-P AT5G17450.1 21798944
AT1G54060.1 Bra025492.1-P AT5G41520.1 21798944
AT1G54060.1 Bra037927.1-P AT5G50335.1 21798944
AT1G54060.1 Bra000622.1-P AT5G60160.1 21798944
AT1G54060.1 Bra010051.1-P AT5G62030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02487 Canola nucleus, plastid 97.66 40.58
Bra037960.1-P Field mustard nucleus, plastid 84.38 35.88
Bra014370.1-P Field mustard nucleus 82.03 31.34
AT1G54060.1 Thale cress nucleus 83.59 27.94
PGSC0003DMT400088401 Potato nucleus, plastid 41.41 14.21
Solyc03g122030.1.1 Tomato nucleus 39.84 14.05
KRH47662 Soybean nucleus, plastid 39.84 13.86
KRH06239 Soybean nucleus 39.84 13.78
VIT_09s0002g00720.t01 Wine grape nucleus 39.06 13.74
Bra034866.1-P Field mustard nucleus 26.56 13.03
HORVU2Hr1G077940.1 Barley cytosol, nucleus, plastid 22.66 12.95
Bra021536.1-P Field mustard nucleus 30.47 12.75
Bra034165.1-P Field mustard nucleus 27.34 12.68
Bra021534.1-P Field mustard nucleus, plastid 30.47 12.58
Bra009119.1-P Field mustard nucleus 24.22 12.35
Bra007407.1-P Field mustard nucleus, plastid 27.34 11.95
Bra003346.1-P Field mustard nucleus 28.12 11.76
GSMUA_Achr8P23650_001 Banana nucleus 28.91 10.85
GSMUA_Achr9P14340_001 Banana nucleus 28.12 9.94
Bra001951.1-P Field mustard nucleus 24.22 9.14
GSMUA_Achr3P05880_001 Banana nucleus 28.12 8.91
EES12241 Sorghum nucleus 27.34 8.58
Zm00001d003549_P001 Maize nucleus 25.78 8.57
Zm00001d010753_P001 Maize nucleus 21.88 8.54
Zm00001d025514_P001 Maize nucleus 25.78 8.42
Os04t0445600-00 Rice nucleus 26.56 8.15
Zm00001d016876_P001 Maize nucleus, plastid 23.44 7.46
TraesCS2D01G311800.1 Wheat nucleus, plastid 23.44 7.26
TraesCS2A01G313300.1 Wheat nucleus, plastid 23.44 7.21
TraesCS2B01G332100.1 Wheat nucleus, plastid 23.44 7.21
TraesCS6B01G230000.1 Wheat nucleus 23.44 7.21
TraesCS6D01G184500.2 Wheat nucleus 23.44 7.21
Os02t0565000-01 Rice nucleus 23.44 7.16
TraesCS6A01G198600.1 Wheat nucleus, plastid 19.53 6.76
HORVU6Hr1G050140.1 Barley nucleus, plastid 21.88 6.7
KXG30464 Sorghum nucleus, plastid 21.09 6.4
Zm00001d042917_P001 Maize golgi, plasma membrane 21.09 4.07
Protein Annotations
EnsemblPlants:Bra030909.1EnsemblPlants:Bra030909.1-PEnsemblPlantsGene:Bra030909PANTHER:PTHR31307PANTHER:PTHR31307:SF34SEG:seg
UniParc:UPI000254561DUniProt:M4EQ38MapMan:15.5.20:::
Description
AT1G54060 (E=1e-026) ASIL1 | ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor
Coordinates
chrA08:-:702911..703297
Molecular Weight (calculated)
14866.7 Da
IEP (calculated)
5.402
GRAVY (calculated)
-1.101
Length
128 amino acids
Sequence
(BLAST)
001: MRWHFRKRSA SETESESEPE HSAESLPPPL QPLPKRLKMG ESGVGEVAKA ILGFTEAYEK AESGKIKLML ELEKERMKFV KEMELQRMQF LRTQMEITQK
101: NQEEERGKLR INDDDDDRNV KNNGDVSS
Best Arabidopsis Sequence Match ( AT1G54060.1 )
(BLAST)
001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS
Arabidopsis Description
ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.