Factsheet for Bra023619.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004399.1-P
Bra007869.1-P
Bra012880.1-P
Bra021504.1-P
Bra027406.1-P
Bra036850.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G17450.1	Bra004399.1-P	AT1G69600.1	18974936
AT5G17450.1	Bra007869.1-P	AT1G69600.1	18974936
AT5G17450.1	Bra021504.1-P	AT3G13710.1	21798944
AT5G17450.1	Bra027406.1-P	AT3G13710.1	21798944
AT5G17450.1	Bra012880.1-P	AT3G50910.1	21798944
AT5G17450.1	Bra036850.1-P	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85452	Canola	cytosol	100.0	100.0
CDY55938	Canola	cytosol	99.33	99.33
AT5G17450.1	Thale cress	cytosol	94.63	94.63
Bra013976.1-P	Field mustard	cytosol	93.96	93.96
VIT_14s0006g01800.t01	Wine grape	cytosol	67.79	69.18
KRG93769	Soybean	cytosol	44.3	68.04
KRG93786	Soybean	cytosol, plastid	42.95	65.98
KRH01671	Soybean	cytosol	63.76	65.52
KRH70455	Soybean	cytosol	63.09	64.83
KRH76245	Soybean	cytosol	38.26	64.77
KRG93169	Soybean	cytosol	61.74	63.89
Solyc03g043640.2.1	Tomato	cytosol	61.74	62.59
KRH15973	Soybean	cytosol, plastid	44.97	61.47
Solyc02g091300.2.1	Tomato	cytosol, plastid	59.73	60.14
PGSC0003DMT400078635	Potato	cytosol, plastid	59.73	60.14
GSMUA_Achr2P07910_001	Banana	cytosol	59.73	58.94
PGSC0003DMT400043033	Potato	cytosol	59.73	56.33
GSMUA_Achr1P12840_001	Banana	cytosol	57.05	56.29
Bra016162.1-P	Field mustard	cytosol	54.36	54.0
Bra012353.1-P	Field mustard	cytosol	55.03	53.95
Bra024556.1-P	Field mustard	cytosol	52.35	53.06
Bra009662.1-P	Field mustard	cytosol	42.28	52.07
Bra033570.1-P	Field mustard	cytosol	46.31	45.1
Bra010738.1-P	Field mustard	cytosol	45.64	44.44
Bra011840.1-P	Field mustard	cytosol	46.31	43.67
Bra037865.1-P	Field mustard	cytosol	40.27	40.0
Bra011581.1-P	Field mustard	cytosol	38.93	37.91
Bra034669.1-P	Field mustard	cytosol	38.93	37.66
Bra018022.1-P	Field mustard	cytosol	30.2	32.61
Bra028528.1-P	Field mustard	cytosol	38.93	32.58
Bra007280.1-P	Field mustard	cytosol	34.23	32.28
Bra037919.1-P	Field mustard	plastid	38.93	31.87
Bra014664.1-P	Field mustard	cytosol	28.86	31.85
Bra032428.1-P	Field mustard	cytosol	31.54	30.13
Bra030119.1-P	Field mustard	cytosol	26.17	27.66

Protein Annotations

EnsemblPlants:Bra023619.1	EnsemblPlants:Bra023619.1-P	EnsemblPlantsGene:Bra023619	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF47	PFAM:PF00403	PFscan:PS50846	SUPFAM:SSF55008
UniParc:UPI0002543129	UniProt:M4E4B6	MapMan:35.1	:	:	:

Description

AT5G17450 (E=5e-081) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related

Coordinates

chrA02:+:4228458..4229979

Molecular Weight (calculated)

16963.4 Da

IEP (calculated)

10.178

GRAVY (calculated)

-0.625

Length

149 amino acids

Sequence
(BLAST)

001: MGAFDYISSF CSYTYSNAKT KRKPLQTVDI KVKMDCDGCE RRVRNVVRRM KGVKSVEVNR KQSRITVNGH VDPNKVLKRV KSTGKKAEFW PYIPQHMVYY
101: PFDTGMYDKR APAGHIRNPT QAFPAANTPG ENYVSLFSDD NVQAACSIM

Best Arabidopsis Sequence Match ( AT5G17450.1 )
(BLAST)

001: MGAFDYISSF CSYTYANAKT KRKPLQTVDI KVKMDCDGCE RRVRNVVRRM KGVKSVEVNR KQSRITVNGH VDPNKVLKRV KSTGKKAEFW PYIPQHMVYY
101: PFAPGMYDKR APAGHIRNPT QSFPTANAPE ENYVSLFSDD NVHAACSIM

Arabidopsis Description

HIPP21Heavy metal-associated isoprenylated plant protein 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.