Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21408 | Canola | cytosol | 100.0 | 96.08 |
| CDY04750 | Canola | cytosol | 97.28 | 93.46 |
| AT1G22990.1 | Thale cress | cytosol | 95.24 | 92.11 |
| Bra012353.1-P | Field mustard | cytosol | 92.52 | 89.47 |
| Bra016162.1-P | Field mustard | cytosol | 74.15 | 72.67 |
| Bra009662.1-P | Field mustard | cytosol | 44.22 | 53.72 |
| Bra013976.1-P | Field mustard | cytosol | 53.74 | 53.02 |
| Bra023619.1-P | Field mustard | cytosol | 53.06 | 52.35 |
| Bra011840.1-P | Field mustard | cytosol | 55.78 | 51.9 |
| Bra037865.1-P | Field mustard | cytosol | 52.38 | 51.33 |
| Bra033570.1-P | Field mustard | cytosol | 51.7 | 49.67 |
| Bra010738.1-P | Field mustard | cytosol | 50.34 | 48.37 |
| Bra011581.1-P | Field mustard | cytosol | 46.26 | 44.44 |
| Bra034669.1-P | Field mustard | cytosol | 46.26 | 44.16 |
| Bra018022.1-P | Field mustard | cytosol | 33.33 | 35.51 |
| Bra032428.1-P | Field mustard | cytosol | 34.01 | 32.05 |
| Bra014664.1-P | Field mustard | cytosol | 28.57 | 31.11 |
| Bra030119.1-P | Field mustard | cytosol | 28.57 | 29.79 |
| Bra007280.1-P | Field mustard | cytosol | 31.97 | 29.75 |
| Bra028528.1-P | Field mustard | cytosol | 34.01 | 28.09 |
| Bra037919.1-P | Field mustard | plastid | 34.69 | 28.02 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | ProteinID:AAN23108 | ProteinID:AAN23108.2 | EMBL:AF528183 | EnsemblPlantsGene:Bra024556 |
| EnsemblPlants:Bra024556.1 | EnsemblPlants:Bra024556.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | UniProt:M4E701 |
| PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF176 | SUPFAM:SSF55008 | UniParc:UPI0002542A10 |
| SEG:seg | : | : | : | : | : |
Description
AT1G22990 (E=3e-072) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related
Coordinates
chrA09:-:24437033..24437831
Molecular Weight (calculated)
16494.1 Da
IEP (calculated)
10.378
GRAVY (calculated)
-0.576
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALNFLSGY FSDHFYVSIR KRKKRKVMQV KIDCDGCERK IKNAVSSMKG AKSVEVNRKM HKVTVSGYVD PKKVLKKVQS TGKKKAELWP YVPYTMVAYP
101: YAAGAYDKRA PPGFVRKSEQ AQAQPGGTDD KLMSLFSDEN PNACTIM
101: YAAGAYDKRA PPGFVRKSEQ AQAQPGGTDD KLMSLFSDEN PNACTIM
001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQV KIDCDGCERK IKNAVSSIKG AKSVEVNRKM HKVTVSGYVD PKKVLKTVQS TGKKKAELWP YVPYTMVAYP
101: YAAGAYDKRA PPGFVRKSEQ AQAQPGSTDD KLMSLFSDEN PNACTVM
101: YAAGAYDKRA PPGFVRKSEQ AQAQPGSTDD KLMSLFSDEN PNACTVM
Arabidopsis Description
HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.