Factsheet for Bra037865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004399.1-P
Bra007869.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08570.1	Bra004399.1-P	AT1G69600.1	18974936
AT4G08570.1	Bra007869.1-P	AT1G69600.1	18974936

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36193	Canola	cytosol	98.0	98.0
CDX75144	Canola	cytosol	79.33	94.44
AT4G08570.1	Thale cress	cytosol	90.0	90.0
KRH62410	Soybean	cytosol, plastid	74.67	75.17
KRH53129	Soybean	cytosol	74.67	75.17
Solyc04g072700.2.1	Tomato	cytosol, plastid	60.0	60.0
Bra011840.1-P	Field mustard	cytosol	62.67	59.49
PGSC0003DMT400024481	Potato	cytosol, plastid	58.67	58.67
PGSC0003DMT400024479	Potato	cytosol, plastid	58.67	58.67
VIT_18s0001g04800.t01	Wine grape	cytosol, plastid	56.67	57.05
Bra024556.1-P	Field mustard	cytosol	51.33	52.38
Bra012353.1-P	Field mustard	cytosol	50.67	50.0
Bra009662.1-P	Field mustard	cytosol	39.33	48.76
Bra010738.1-P	Field mustard	cytosol	46.0	45.1
Bra016162.1-P	Field mustard	cytosol	44.67	44.67
Bra033570.1-P	Field mustard	cytosol	44.67	43.79
Bra011581.1-P	Field mustard	cytosol	42.67	41.83
Bra034669.1-P	Field mustard	cytosol	42.67	41.56
Bra023619.1-P	Field mustard	cytosol	40.0	40.27
Bra013976.1-P	Field mustard	cytosol	40.0	40.27
Bra018022.1-P	Field mustard	cytosol	32.67	35.51
Bra030119.1-P	Field mustard	cytosol	30.0	31.91
Bra032428.1-P	Field mustard	cytosol	31.33	30.13
Bra014664.1-P	Field mustard	cytosol	25.33	28.15
Bra007280.1-P	Field mustard	cytosol	28.67	27.22
Bra037919.1-P	Field mustard	plastid	30.0	24.73
Bra028528.1-P	Field mustard	cytosol	29.33	24.72

Protein Annotations

EnsemblPlants:Bra037865.1	EnsemblPlants:Bra037865.1-P	EnsemblPlantsGene:Bra037865	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF84	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI0002542315	UniProt:M4F9V1	MapMan:35.1	:	:

Description

AT4G08570 (E=7e-060) | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related

Coordinates

chrA09:+:10572627..10573852

Molecular Weight (calculated)

17040.0 Da

IEP (calculated)

10.123

GRAVY (calculated)

-0.489

Length

150 amino acids

Sequence
(BLAST)

001: MGVERTMEYI SELLKMRRKK KKKPMQTVAL RVARIDCEGC ERKIKQILSG VKGVKSVVVD GKQQKVTVMG YIEPKKVLEA AKSTRKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCSIM

Best Arabidopsis Sequence Match ( AT4G08570.1 )
(BLAST)

001: MGVEGTMEYI SDLLKKRKRK KKKQMQTVAL RVARIDCEGC ERKIKHVLSG VKGVKSVDVD VKLQKVTVTG YIDPKKVLEA AKSTKKKVEL WPYVPYTMVA
101: NPYISQAYDK KAPPNMVRKV PDTASVNETT VDDSYTIMFS DENPNSCAIM

Arabidopsis Description

HIPP24Heavy metal-associated isoprenylated plant protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O81464]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.