Factsheet for Bra032428.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06206	Canola	cytosol	96.79	100.0
AT1G06330.1	Thale cress	cytosol	88.46	92.0
VIT_12s0028g02190.t01	Wine grape	cytosol	63.46	67.81
KRH22286	Soybean	cytosol	61.54	67.61
KRH27043	Soybean	cytosol	60.9	66.9
GSMUA_Achr10P...	Banana	cytosol	48.72	53.9
GSMUA_Achr3P15460_001	Banana	cytosol	46.79	53.28
CDY09978	Canola	cytosol	98.08	52.4
GSMUA_Achr7P13900_001	Banana	cytosol	49.36	52.38
Solyc07g055010.2.1	Tomato	extracellular	50.64	52.32
TraesCS3B01G329600.1	Wheat	cytosol	45.51	47.97
TraesCS3D01G295000.1	Wheat	cytosol	44.87	47.3
Os01t0758000-00	Rice	cytosol	46.15	47.06
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	34.62	46.96
GSMUA_Achr6P14470_001	Banana	cytosol	42.95	46.53
EES03638	Sorghum	cytosol	46.79	45.34
Zm00001d043403_P001	Maize	cytosol	44.87	45.16
HORVU3Hr1G072940.2	Barley	cytosol	43.59	43.31
Bra030119.1-P	Field mustard	cytosol	38.46	42.55
Bra014664.1-P	Field mustard	cytosol	33.33	38.52
Bra018022.1-P	Field mustard	cytosol	33.97	38.41
Bra009662.1-P	Field mustard	cytosol	29.49	38.02
Bra007280.1-P	Field mustard	cytosol	35.9	35.44
Bra024556.1-P	Field mustard	cytosol	32.05	34.01
Bra016162.1-P	Field mustard	cytosol	32.69	34.0
Bra011840.1-P	Field mustard	cytosol	33.97	33.54
Bra012353.1-P	Field mustard	cytosol	31.41	32.24
Bra023619.1-P	Field mustard	cytosol	30.13	31.54
Bra037865.1-P	Field mustard	cytosol	30.13	31.33
Bra013976.1-P	Field mustard	cytosol	29.49	30.87
Bra028528.1-P	Field mustard	cytosol	33.97	29.78
Bra011581.1-P	Field mustard	cytosol	28.21	28.76
Bra034669.1-P	Field mustard	cytosol	28.21	28.57
Bra033570.1-P	Field mustard	cytosol	27.56	28.1
Bra010738.1-P	Field mustard	cytosol	27.56	28.1
Bra037919.1-P	Field mustard	plastid	32.05	27.47

Protein Annotations

EnsemblPlants:Bra032428.1	EnsemblPlants:Bra032428.1-P	EnsemblPlantsGene:Bra032428	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF112	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI00025434C8	UniProt:M4EUE6	MapMan:35.1	:	:

Description

AT1G06330 (E=2e-073) | copper-binding family protein

Coordinates

chrA09:+:36022660..36023408

Molecular Weight (calculated)

17364.3 Da

IEP (calculated)

8.330

GRAVY (calculated)

-0.717

Length

156 amino acids

Sequence
(BLAST)

001: MTTIEMRVHM DCVGCESRVK SALQKMRGVD EVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPF NPDHSSLLGG GSNSTNGGYF YNPHGCNGPI
101: NHHAPVPGSS YNYYKHGYDS NDYSSYQHHP VHASIFSHQA GSKFSDENPN AACSIM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.