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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g055010.2.1 Tomato extracellular 95.65 72.85
PGSC0003DMT400026532 Potato cytosol 53.04 56.48
VIT_12s0028g02190.t01 Wine grape cytosol 51.3 40.41
KRH22286 Soybean cytosol 49.57 40.14
KRH27043 Soybean cytosol 48.7 39.44
AT1G06330.1 Thale cress cytosol 47.83 36.67
CDY06206 Canola cytosol 46.96 35.76
TraesCS3B01G329600.1 Wheat cytosol 45.22 35.14
GSMUA_Achr3P15460_001 Banana cytosol 41.74 35.04
Bra032428.1-P Field mustard cytosol 46.96 34.62
TraesCS3D01G295000.1 Wheat cytosol 44.35 34.46
PGSC0003DMT400079287 Potato cytosol 28.7 34.02
GSMUA_Achr10P... Banana cytosol 40.87 33.33
GSMUA_Achr7P13900_001 Banana cytosol 42.61 33.33
HORVU3Hr1G072940.2 Barley cytosol 43.48 31.85
Zm00001d043403_P001 Maize cytosol 41.74 30.97
Os01t0758000-00 Rice cytosol 40.87 30.72
EES03638 Sorghum cytosol 42.61 30.43
GSMUA_Achr6P14470_001 Banana cytosol 37.39 29.86
PGSC0003DMT400015350 Potato cytosol 30.43 23.81
PGSC0003DMT400037204 Potato cytosol 27.83 23.02
PGSC0003DMT400056666 Potato cytosol 29.57 22.37
PGSC0003DMT400056199 Potato cytosol 28.7 21.43
PGSC0003DMT400024481 Potato cytosol, plastid 27.83 21.33
PGSC0003DMT400015784 Potato cytosol 27.83 20.91
PGSC0003DMT400024479 Potato cytosol, plastid 26.96 20.67
PGSC0003DMT400009390 Potato cytosol 27.83 20.13
PGSC0003DMT400078635 Potato cytosol, plastid 25.22 19.59
PGSC0003DMT400012844 Potato plastid 30.43 19.02
PGSC0003DMT400043033 Potato cytosol 26.09 18.99
CDY09978 Canola cytosol 46.96 18.49
PGSC0003DMT400079324 Potato endoplasmic reticulum 28.7 18.33
Protein Annotations
EnsemblPlants:PGSC0003DMT400052612EnsemblPlantsGene:PGSC0003DMG400020423PANTHER:PTHR22814PANTHER:PTHR22814:SF112PGSC:PGSC0003DMG400020423UniParc:UPI000296AC0D
UniProt:M1BTP0MapMan:35.1::::
Description
Copper transport protein atox1 [Source:PGSC_GENE;Acc:PGSC0003DMG400020423]
Coordinates
chr7:-:50105621..50106073
Molecular Weight (calculated)
13142.2 Da
IEP (calculated)
9.782
GRAVY (calculated)
-1.076
Length
115 amino acids
Sequence
(BLAST)
001: MAMQKVTVTG WADQKKILKT VRRTGKRAEI WQFPHNPEMR NNPSYVTDHY YQQQGSSGPA TYYAGEPPAS AYNYRKHGYD NYGRAYSLYR GNSNTFGSRV
101: GDAFSDENPR GCNIM
Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)
001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.