Factsheet for TraesCS3B01G329600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G295000.1	Wheat	cytosol	98.65	98.65
HORVU3Hr1G072940.2	Barley	cytosol	95.27	89.81
Os01t0758000-00	Rice	cytosol	75.68	73.2
Zm00001d043403_P001	Maize	cytosol	72.97	69.68
EES03638	Sorghum	cytosol	75.68	69.57
GSMUA_Achr3P15460_001	Banana	cytosol	58.11	62.77
GSMUA_Achr10P...	Banana	cytosol	50.0	52.48
GSMUA_Achr7P13900_001	Banana	cytosol	52.03	52.38
KRH22286	Soybean	cytosol	48.65	50.7
GSMUA_Achr6P14470_001	Banana	cytosol	48.65	50.0
KRH27043	Soybean	cytosol	47.97	50.0
Solyc07g055010.2.1	Tomato	extracellular	50.68	49.67
AT1G06330.1	Thale cress	cytosol	47.97	47.33
VIT_12s0028g02190.t01	Wine grape	cytosol	45.27	45.89
Bra032428.1-P	Field mustard	cytosol	47.97	45.51
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	35.14	45.22
CDY06206	Canola	cytosol	45.95	45.03
TraesCS7B01G237800.1	Wheat	cytosol	44.59	38.82
TraesCS6B01G287000.1	Wheat	mitochondrion	37.84	36.84
TraesCS3B01G238100.1	Wheat	cytosol	21.62	32.0
TraesCS2B01G077100.1	Wheat	cytosol, plastid	33.11	31.61
TraesCS4B01G105100.1	Wheat	mitochondrion, plastid	31.08	31.08
TraesCS5B01G191700.1	Wheat	cytosol	33.11	30.43
TraesCS7B01G285400.1	Wheat	mitochondrion, plastid	31.76	29.19
TraesCS6B01G059000.1	Wheat	cytosol	29.73	27.67
TraesCS2B01G186900.1	Wheat	cytosol	29.73	27.16
TraesCS2B01G304100.1	Wheat	cytosol	27.7	27.15
TraesCS5B01G242000.1	Wheat	cytosol	27.7	26.97
TraesCS6B01G332000.2	Wheat	cytosol	29.05	26.54
TraesCS4B01G348900.1	Wheat	plastid	32.43	24.62
CDY09978	Canola	cytosol	46.62	23.63
TraesCS1B01G215100.1	Wheat	cytosol, plastid	29.05	21.83

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF107	SUPFAM:SSF55008	EnsemblPlantsGene:TraesCS3B01G329600	EnsemblPlants:TraesCS3B01G329600.1
TIGR:cd00371	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:532641551..532642204

Molecular Weight (calculated)

15995.1 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.334

Length

148 amino acids

Sequence
(BLAST)

001: MTIVEMCVHM CCAGCEKKIR KAVERLEGVD AVEIDMEMQK VTVNGDVDQK KVLKTVRRTG KRAVLWPTPF IAGAGAGGAV NLLAQQHQYH PGGAQMYATH
101: ASGPTSSYNY YKHGYDDSRL YGANSAVVGG TRATDYFSDE NPGGCSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.