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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • mitochondrion 4
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G313300.1
TraesCS2A01G586100.1
TraesCS2B01G332100.1
TraesCS2B01G596900.1
TraesCS2D01G311800.1
TraesCS2D01G600500.1
TraesCS6A01G198600.1
TraesCS6B01G230000.1
TraesCS6D01G184500.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G38580.1 TraesCS2A01G586100.1 AT4G27780.1 18823312
AT4G38580.1 TraesCS2B01G596900.1 AT4G27780.1 18823312
AT4G38580.1 TraesCS2D01G600500.1 AT4G27780.1 18823312
AT5G66110.1 TraesCS2A01G313300.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS2B01G332100.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS2D01G311800.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6A01G198600.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6B01G230000.1 AT1G54060.1 21798944
AT5G66110.1 TraesCS6D01G184500.2 AT1G54060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G382700.1 Wheat mitochondrion, plastid 99.38 99.38
TraesCS7D01G379100.1 Wheat mitochondrion, plastid 98.14 98.14
HORVU7Hr1G090970.1 Barley mitochondrion 91.93 93.08
Os04t0244800-01 Rice plasma membrane 67.7 70.32
EES11880 Sorghum cytosol 67.7 70.32
Zm00001d004138_P001 Maize cytosol 67.08 69.68
TraesCS2B01G077100.1 Wheat cytosol, plastid 67.08 69.68
TraesCS6B01G059000.1 Wheat cytosol 68.32 69.18
GSMUA_Achr4P25770_001 Banana cytosol, plastid 60.25 62.58
VIT_03s0038g02440.t01 Wine grape cytosol 59.01 61.29
GSMUA_Achr1P02370_001 Banana cytosol, plastid 59.01 61.29
Bra009662.1-P Field mustard cytosol 45.34 60.33
KRH60697 Soybean cytosol 56.52 59.09
CDY65011 Canola cytosol 55.28 58.17
Bra033570.1-P Field mustard cytosol 55.28 58.17
VIT_04s0023g03910.t01 Wine grape cytosol 43.48 57.85
CDY12089 Canola cytosol 54.66 57.52
AT4G38580.1 Thale cress cytosol 54.66 57.52
Bra010738.1-P Field mustard cytosol 54.66 57.52
CDX90282 Canola cytosol 54.66 57.52
CDX72748 Canola cytosol 54.04 56.86
PGSC0003DMT400009390 Potato cytosol 55.9 56.6
CDX88005 Canola cytosol 50.93 56.55
CDY07874 Canola cytosol 50.93 56.55
Solyc02g083550.1.1 Tomato cytosol 55.28 55.97
PGSC0003DMT400015784 Potato cytosol 52.8 55.56
Solyc01g111600.2.1 Tomato nucleus 52.8 55.56
AT5G66110.1 Thale cress cytosol 50.31 55.1
KRH29001 Soybean cytosol 52.8 54.49
VIT_04s0023g03890.t01 Wine grape cytosol 53.42 53.75
CDX69108 Canola cytosol 50.93 53.59
CDY52653 Canola cytosol 50.93 53.59
Bra011581.1-P Field mustard cytosol 50.93 53.59
AT4G35060.1 Thale cress cytosol 49.69 52.29
CDX76309 Canola cytosol 49.07 51.3
Bra034669.1-P Field mustard cytosol 49.07 51.3
CDY17504 Canola cytosol 48.45 50.65
TraesCS2B01G304100.1 Wheat cytosol 44.1 47.02
TraesCS4B01G105100.1 Wheat mitochondrion, plastid 41.61 45.27
TraesCS5B01G191700.1 Wheat cytosol 44.1 44.1
TraesCS5B01G242000.1 Wheat cytosol 41.61 44.08
KRH24318 Soybean cytosol, nucleus, plastid 22.98 43.02
TraesCS2B01G186900.1 Wheat cytosol 42.86 42.59
KRH28829 Soybean cytosol 28.57 38.02
TraesCS3B01G238100.1 Wheat cytosol 22.98 37.0
TraesCS6B01G332000.2 Wheat cytosol 32.3 32.1
TraesCS3B01G329600.1 Wheat cytosol 29.19 31.76
TraesCS6B01G287000.1 Wheat mitochondrion 26.71 28.29
TraesCS7B01G237800.1 Wheat cytosol 28.57 27.06
TraesCS4B01G348900.1 Wheat plastid 26.09 21.54
TraesCS1B01G215100.1 Wheat cytosol, plastid 25.47 20.81
Protein Annotations
EnsemblPlants:TraesCS7B01G285400.1EnsemblPlantsGene:TraesCS7B01G285400Gene3D:3.30.70.100GO:GO:0003674GO:GO:0005488GO:GO:0006810
GO:GO:0008150GO:GO:0030001GO:GO:0046872InterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
PANTHER:PTHR22814PANTHER:PTHR22814:SF168PFAM:PF00403PFscan:PS50846SUPFAM:SSF55008TIGR:cd00371
MapMan:35.1:::::
Description
No Description!
Coordinates
chr7B:-:519523328..519524576
Molecular Weight (calculated)
17527.0 Da
IEP (calculated)
8.962
GRAVY (calculated)
-0.348
Length
161 amino acids
Sequence
(BLAST)
001: MGFLEALSGL CRSCPAPLTR GHLQKGRQLE TVEMKVRIDC EGCVSKIRKT LEGMDGVTDV DVVPRENRVT VTGYVDAAKV MRRVARKTGK RVEPWPYVPY
101: DVVAHPYAPG AYDKRAPAGY VRDVMANPGG ANASFARATS TETRYTGAFS DENPNAACAI M
Best Arabidopsis Sequence Match ( AT4G35060.1 )
(BLAST)
001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
Arabidopsis Description
HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.