Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65011 | Canola | cytosol | 96.08 | 96.08 |
| Bra033570.1-P | Field mustard | cytosol | 96.08 | 96.08 |
| CDX90282 | Canola | cytosol | 95.42 | 95.42 |
| Bra010738.1-P | Field mustard | cytosol | 95.42 | 95.42 |
| CDY12089 | Canola | cytosol | 94.12 | 94.12 |
| CDX72748 | Canola | cytosol | 94.12 | 94.12 |
| PGSC0003DMT400015784 | Potato | cytosol | 86.27 | 86.27 |
| Solyc01g111600.2.1 | Tomato | nucleus | 85.62 | 85.62 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 81.05 | 80.0 |
| AT4G35060.1 | Thale cress | cytosol | 74.51 | 74.51 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 73.86 | 72.9 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 70.59 | 69.68 |
| AT5G66110.1 | Thale cress | cytosol | 65.36 | 68.03 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 66.67 | 65.81 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 66.67 | 65.81 |
| EES11880 | Sorghum | cytosol | 66.67 | 65.81 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 66.67 | 65.81 |
| Zm00001d004138_P001 | Maize | cytosol | 66.67 | 65.81 |
| Os04t0244800-01 | Rice | plasma membrane | 66.01 | 65.16 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 64.05 | 61.64 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 64.05 | 61.64 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 63.4 | 61.01 |
| Os03t0156600-01 | Rice | cytosol | 59.48 | 58.71 |
| EER92834 | Sorghum | cytosol | 58.17 | 57.05 |
| Zm00001d027720_P001 | Maize | cytosol | 56.86 | 55.77 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 54.9 | 55.26 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 56.86 | 54.72 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 57.52 | 54.66 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 57.52 | 54.66 |
| AT1G22990.1 | Thale cress | cytosol | 53.59 | 53.95 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 56.21 | 53.42 |
| Os01t0507700-01 | Rice | plasma membrane | 50.33 | 50.99 |
| Zm00001d034978_P001 | Maize | cytosol | 50.33 | 50.99 |
| EES14354 | Sorghum | cytosol | 50.33 | 50.99 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 49.67 | 50.0 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 49.67 | 50.0 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 49.02 | 49.67 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 49.02 | 49.67 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 49.02 | 49.67 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 49.02 | 49.34 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 49.02 | 49.34 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 48.37 | 49.01 |
| AT5G17450.1 | Thale cress | cytosol | 47.71 | 48.99 |
| Zm00001d052760_P001 | Maize | cytosol | 47.71 | 48.34 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 47.71 | 48.34 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 47.71 | 48.34 |
| AT4G08570.1 | Thale cress | cytosol | 46.41 | 47.33 |
| AT4G39700.1 | Thale cress | cytosol | 47.71 | 46.2 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 28.1 | 43.0 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 62.09 | 42.22 |
| AT3G48970.1 | Thale cress | cytosol | 31.37 | 34.29 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 30.07 | 29.68 |
| AT1G06330.1 | Thale cress | cytosol | 28.76 | 29.33 |
| AT3G56891.1 | Thale cress | cytosol | 31.37 | 28.92 |
| AT1G29100.2 | Thale cress | cytosol | 27.45 | 28.57 |
| AT4G10465.1 | Thale cress | plastid | 31.37 | 26.23 |
| AT2G18196.1 | Thale cress | plastid | 28.1 | 24.16 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:830015 | UniProt:A0A178V1F5 | ProteinID:AEE86950.1 | EMBL:AF324677 |
| EMBL:AF326881 | EMBL:AF339701 | EMBL:AF380660 | ProteinID:ANM67729.1 | ArrayExpress:AT4G38580 | EnsemblPlantsGene:AT4G38580 |
| RefSeq:AT4G38580 | TAIR:AT4G38580 | RefSeq:AT4G38580-TAIR-G | EnsemblPlants:AT4G38580.1 | TAIR:AT4G38580.1 | Symbol:ATFP6 |
| EMBL:AY056095 | EMBL:AY084288 | ProteinID:CAB37514.1 | ProteinID:CAB80522.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010286 | GO:GO:0016020 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0031965 | GO:GO:0032791 | GO:GO:0046870 | GO:GO:0046872 | GO:GO:0046916 |
| InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | RefSeq:NP_001320160.1 | RefSeq:NP_195570.1 | ProteinID:OAP00180.1 |
| PFAM:PF00403 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF14 | UniProt:Q9SZN7 | SUPFAM:SSF55008 |
| EMBL:U64909 | UniParc:UPI000009D43B | : | : | : | : |
Description
HIPP26HIPP26 [Source:UniProtKB/TrEMBL;Acc:A0A178V1F5]
Coordinates
chr4:+:18034131..18035889
Molecular Weight (calculated)
17024.6 Da
IEP (calculated)
9.565
GRAVY (calculated)
-0.418
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLDHVSEM FDCSHGHKIK KRKQLQTVEI KVKMDCEGCE RKVRRSVEGM KGVSSVTLEP KAHKVTVVGY VDPNKVVARM SHRTGKKVEL WPYVPYDVVA
101: HPYAAGVYDK KAPSGYVRRV DDPGVSQLAR ASSTEVRYTT AFSDENPAAC VVM
101: HPYAAGVYDK KAPSGYVRRV DDPGVSQLAR ASSTEVRYTT AFSDENPAAC VVM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.