Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G043000.1 | Wheat | cytosol | 99.37 | 99.37 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 99.37 | 99.37 |
| Zm00001d004138_P001 | Maize | cytosol | 75.47 | 77.42 |
| Os04t0244800-01 | Rice | plasma membrane | 74.21 | 76.13 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 73.58 | 75.48 |
| EES11880 | Sorghum | cytosol | 72.96 | 74.84 |
| Bra009662.1-P | Field mustard | cytosol | 55.35 | 72.73 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 69.18 | 70.97 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 69.18 | 70.97 |
| CDX88005 | Canola | cytosol | 62.26 | 68.28 |
| CDY07874 | Canola | cytosol | 62.26 | 68.28 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 68.55 | 67.7 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 93.71 | 66.22 |
| AT5G66110.1 | Thale cress | cytosol | 59.75 | 64.63 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 62.89 | 64.52 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 48.43 | 63.64 |
| AT4G38580.1 | Thale cress | cytosol | 61.01 | 63.4 |
| KRH60697 | Soybean | cytosol | 61.01 | 62.99 |
| CDY65011 | Canola | cytosol | 60.38 | 62.75 |
| Bra033570.1-P | Field mustard | cytosol | 60.38 | 62.75 |
| Bra010738.1-P | Field mustard | cytosol | 60.38 | 62.75 |
| CDX90282 | Canola | cytosol | 60.38 | 62.75 |
| CDY12089 | Canola | cytosol | 60.38 | 62.75 |
| PGSC0003DMT400015784 | Potato | cytosol | 59.75 | 62.09 |
| Solyc01g111600.2.1 | Tomato | nucleus | 59.75 | 62.09 |
| PGSC0003DMT400009390 | Potato | cytosol | 61.64 | 61.64 |
| CDX72748 | Canola | cytosol | 59.12 | 61.44 |
| Solyc02g083550.1.1 | Tomato | cytosol | 61.01 | 61.01 |
| KRH29001 | Soybean | cytosol | 58.49 | 59.62 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 58.49 | 58.12 |
| AT4G35060.1 | Thale cress | cytosol | 51.57 | 53.59 |
| Bra011581.1-P | Field mustard | cytosol | 51.57 | 53.59 |
| CDY52653 | Canola | cytosol | 51.57 | 53.59 |
| CDX69108 | Canola | cytosol | 51.57 | 53.59 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 50.31 | 52.63 |
| CDX76309 | Canola | cytosol | 49.06 | 50.65 |
| Bra034669.1-P | Field mustard | cytosol | 49.06 | 50.65 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 47.8 | 50.33 |
| CDY17504 | Canola | cytosol | 48.43 | 50.0 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 47.17 | 49.67 |
| TraesCS5D01G199500.1 | Wheat | cytosol | 48.43 | 48.12 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 25.16 | 46.51 |
| TraesCS4D01G102000.1 | Wheat | mitochondrion, plastid | 42.14 | 45.27 |
| TraesCS2D01G168000.1 | Wheat | cytosol | 41.51 | 40.74 |
| KRH28829 | Soybean | cytosol | 30.19 | 39.67 |
| TraesCS6D01G282300.1 | Wheat | cytosol, mitochondrion | 39.62 | 39.13 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 30.82 | 32.67 |
| TraesCS3D01G295000.1 | Wheat | cytosol | 27.04 | 29.05 |
| TraesCS7D01G333800.1 | Wheat | cytosol | 28.93 | 26.9 |
| TraesCS4D01G343300.1 | Wheat | plastid | 28.3 | 23.08 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 27.04 | 21.83 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G049600.1 | EnsemblPlantsGene:TraesCS6D01G049600 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF168 | PFAM:PF00403 | SEG:seg | SUPFAM:SSF55008 | TIGR:cd00371 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:24029269..24029748
Molecular Weight (calculated)
17558.3 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.440
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MGILDAMSDM CACPTVRTRR HIKKRPQLET VEMKVRIDCE GCERRIRKAV DGIRGVTGVE VLPKQNKVAV TGYIDDPAKL MRRVARKTGK KVEPWPYVPY
101: DVVPHPYAPG AYDKKAPPGY VRNVVADPDA APLARASSTE VKYTSAFSDE NPNAACAVM
101: DVVPHPYAPG AYDKKAPPGY VRNVVADPDA APLARASSTE VKYTSAFSDE NPNAACAVM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.