Factsheet for Bra009662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004399.1-P
Bra007869.1-P
Bra014370.1-P
Bra030909.1-P
Bra037960.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66110.1	Bra014370.1-P	AT1G54060.1	21798944
AT5G66110.1	Bra030909.1-P	AT1G54060.1	21798944
AT5G66110.1	Bra037960.1-P	AT1G54060.1	21798944
AT5G66110.1	Bra004399.1-P	AT1G69600.1	18974936
AT5G66110.1	Bra007869.1-P	AT1G69600.1	18974936

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88005	Canola	cytosol	100.0	83.45
AT5G66110.1	Thale cress	cytosol	95.87	78.91
VIT_04s0023g03910.t01	Wine grape	cytosol	71.9	71.9
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	78.51	61.29
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	73.55	57.42
Bra033570.1-P	Field mustard	cytosol	70.25	55.56
Bra010738.1-P	Field mustard	cytosol	70.25	55.56
Os03t0156600-01	Rice	cytosol	71.07	55.48
TraesCS6D01G049600.1	Wheat	cytosol	72.73	55.35
TraesCS6B01G059000.1	Wheat	cytosol	72.73	55.35
TraesCS6A01G043000.1	Wheat	cytosol	72.73	55.35
Solyc02g083550.1.1	Tomato	cytosol	72.73	55.35
VIT_04s0023g03890.t01	Wine grape	cytosol	72.73	55.0
Zm00001d004138_P001	Maize	cytosol	69.42	54.19
EER92834	Sorghum	cytosol	69.42	53.85
PGSC0003DMT400009390	Potato	cytosol	69.42	52.83
Zm00001d027720_P001	Maize	cytosol	67.77	52.56
TraesCS2A01G064900.1	Wheat	nucleus	66.94	52.26
EES11880	Sorghum	cytosol	66.94	52.26
TraesCS2B01G077100.1	Wheat	cytosol, plastid	66.94	52.26
TraesCS2D01G063000.1	Wheat	cytosol, plastid	66.94	52.26
Os04t0244800-01	Rice	plasma membrane	65.29	50.97
Bra011581.1-P	Field mustard	cytosol	63.64	50.33
Bra034669.1-P	Field mustard	cytosol	61.98	48.7
HORVU7Hr1G090970.1	Barley	mitochondrion	62.81	47.8
Zm00001d034978_P001	Maize	cytosol	59.5	47.68
EES14354	Sorghum	cytosol	57.02	45.7
KRH28829	Soybean	cytosol	45.45	45.45
TraesCS7A01G382700.1	Wheat	mitochondrion, plastid	60.33	45.34
TraesCS7B01G285400.1	Wheat	mitochondrion, plastid	60.33	45.34
Zm00001d052760_P001	Maize	cytosol	55.37	44.37
Bra024556.1-P	Field mustard	cytosol	53.72	44.22
TraesCS7D01G379100.1	Wheat	mitochondrion, plastid	58.68	44.1
TraesCS3B01G238100.1	Wheat	cytosol	36.36	44.0
Bra016162.1-P	Field mustard	cytosol	53.72	43.33
TraesCS2D01G285700.1	Wheat	cytosol	53.72	43.05
TraesCS2B01G304100.1	Wheat	cytosol	53.72	43.05
TraesCS2A01G287200.1	Wheat	cytosol	53.72	43.05
Os01t0507700-01	Rice	plasma membrane	53.72	43.05
Bra013976.1-P	Field mustard	cytosol	52.89	42.95
TraesCS5A01G244000.1	Wheat	cytosol	53.72	42.76
TraesCS5D01G250700.1	Wheat	cytosol	53.72	42.76
TraesCS3A01G206100.1	Wheat	cytosol	52.89	42.38
HORVU3Hr1G049780.1	Barley	cytosol	52.89	42.38
TraesCS3D01G209500.1	Wheat	cytosol	52.89	42.38
Bra023619.1-P	Field mustard	cytosol	52.07	42.28
HORVU5Hr1G069380.2	Barley	cytosol	52.89	42.11
Bra012353.1-P	Field mustard	cytosol	52.07	41.45
TraesCS5B01G242000.1	Wheat	cytosol	52.07	41.45
Bra037865.1-P	Field mustard	cytosol	48.76	39.33
HORVU6Hr1G009000.1	Barley	cytosol, plastid, vacuole	71.9	38.67
Bra011840.1-P	Field mustard	cytosol	49.59	37.97
Bra018022.1-P	Field mustard	cytosol	36.36	31.88
Bra014664.1-P	Field mustard	cytosol	33.06	29.63
Bra032428.1-P	Field mustard	cytosol	38.02	29.49
Bra030119.1-P	Field mustard	cytosol	33.06	28.37
Bra007280.1-P	Field mustard	cytosol	35.54	27.22
Bra037919.1-P	Field mustard	plastid	30.58	20.33
Bra028528.1-P	Field mustard	cytosol	29.75	20.22
HORVU2Hr1G011060.1	Barley	nucleus, plastid	20.66	16.13

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EnsemblPlantsGene:Bra009662	EnsemblPlants:Bra009662.1	EnsemblPlants:Bra009662.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
UniProt:M4CZL5	PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF14	SUPFAM:SSF55008
UniParc:UPI000253F026	SEG:seg	:	:	:	:

Description

AT5G66110 (E=4e-054) | metal ion binding

Coordinates

chrA06:-:16433437..16433802

Molecular Weight (calculated)

13426.2 Da

IEP (calculated)

9.658

GRAVY (calculated)

-0.472

Length

121 amino acids

Sequence
(BLAST)

001: MDCEGCERRV RKSVQGMKGV TNVTVDPKQS KLTVEGFVQP NKVVRRVMHR TGKKAELWPY VPYEVVPHPY APGAYDKKAP PGYVRNALAD PLVAPLARAS
101: SFEVKYTSAF SDDNPNACTI M

Best Arabidopsis Sequence Match ( AT5G66110.1 )
(BLAST)

001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM

Arabidopsis Description

HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.