Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g00720.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66110.1 | VIT_09s0002g00720.t01 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 98.35 | 74.38 |
| Bra009662.1-P | Field mustard | cytosol | 71.9 | 71.9 |
| CDX88005 | Canola | cytosol | 71.9 | 60.0 |
| CDY07874 | Canola | cytosol | 71.9 | 60.0 |
| AT5G66110.1 | Thale cress | cytosol | 72.73 | 59.86 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 74.38 | 58.06 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 71.9 | 56.13 |
| Solyc02g083550.1.1 | Tomato | cytosol | 73.55 | 55.97 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 71.07 | 55.48 |
| PGSC0003DMT400009390 | Potato | cytosol | 71.9 | 54.72 |
| Zm00001d004138_P001 | Maize | cytosol | 64.46 | 50.32 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 62.81 | 49.03 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 62.81 | 49.03 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 62.81 | 49.03 |
| Os04t0244800-01 | Rice | plasma membrane | 62.81 | 49.03 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 63.64 | 48.43 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 63.64 | 48.43 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 63.64 | 48.43 |
| EES11880 | Sorghum | cytosol | 61.98 | 48.39 |
| EER92834 | Sorghum | cytosol | 61.16 | 47.44 |
| Os03t0156600-01 | Rice | cytosol | 60.33 | 47.1 |
| Zm00001d027720_P001 | Maize | cytosol | 58.68 | 45.51 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 59.5 | 45.28 |
| VIT_01s0011g04700.t01 | Wine grape | cytosol | 53.72 | 44.22 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 36.36 | 44.0 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 57.85 | 43.48 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 57.85 | 43.48 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 57.85 | 43.48 |
| Zm00001d034978_P001 | Maize | cytosol | 53.72 | 43.05 |
| KRH28829 | Soybean | cytosol | 42.98 | 42.98 |
| EES14354 | Sorghum | cytosol | 52.89 | 42.38 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 52.89 | 42.11 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 52.07 | 41.45 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 52.07 | 41.45 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 52.07 | 41.45 |
| VIT_14s0006g01800.t01 | Wine grape | cytosol | 49.59 | 41.1 |
| Os01t0507700-01 | Rice | plasma membrane | 51.24 | 41.06 |
| VIT_07s0031g01160.t01 | Wine grape | cytosol | 50.41 | 40.4 |
| Zm00001d052760_P001 | Maize | cytosol | 50.41 | 40.4 |
| VIT_18s0001g04800.t01 | Wine grape | cytosol, plastid | 49.59 | 40.27 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 49.59 | 39.74 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 49.59 | 39.74 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 49.59 | 39.74 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 48.76 | 39.07 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 48.76 | 39.07 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 48.76 | 39.07 |
| VIT_08s0040g00130.t01 | Wine grape | cytosol | 37.19 | 36.0 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 61.98 | 33.33 |
| VIT_12s0028g02190.t01 | Wine grape | cytosol | 35.54 | 29.45 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 33.88 | 28.87 |
| VIT_10s0003g01220.t01 | Wine grape | cytosol | 33.06 | 27.59 |
| VIT_16s0050g00150.t01 | Wine grape | mitochondrion, plastid | 38.02 | 26.74 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 21.49 | 16.77 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | ProteinID:CBI17327 | ProteinID:CBI17327.3 | UniProt:D7SNU8 | EMBL:FN594959 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 | GO:GO:0046872 |
| GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 |
| PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF14 | SUPFAM:SSF55008 | UniParc:UPI00015CC16D | ArrayExpress:VIT_04s0023g03910 |
| EnsemblPlantsGene:VIT_04s0023g03910 | EnsemblPlants:VIT_04s0023g03910.t01 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:20391430..20391823
Molecular Weight (calculated)
13647.4 Da
IEP (calculated)
9.381
GRAVY (calculated)
-0.614
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCEGCERQV RKSVEGMKGV TQVVIEPKLN KLTVVGYVEP KKVLHRVKHR TGKRPVMWPY VPYDEIPHPY APGVYDRKAP SGYVRNPSQD PQVSNLARAS
101: STEVKYTTAF SDDNPNACII M
101: STEVKYTTAF SDDNPNACII M
001: MDCEGCERRV RKSVEGMKGV SKVTVDPKQS KLTVEGFVQP SKVVHRVMHR TGKKAELWPY VPYEVVPHPY APGAYDKKAP PGYVRNALAD PLVAPLARAS
101: SFEVKYTSAF SDDNPNACTI M
101: SFEVKYTSAF SDDNPNACTI M
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.