Subcellular Localization
min:
: max
Winner_takes_all: plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- vacuole 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G005790.3 | |
| HORVU2Hr1G077940.1 | |
| HORVU6Hr1G050140.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G38580.1 | HORVU0Hr1G005790.3 | AT4G27780.1 | 18823312 |
| AT5G66110.1 | HORVU2Hr1G077940.1 | AT1G54060.1 | 21798944 |
| AT5G66110.1 | HORVU6Hr1G050140.1 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G059000.1 | Wheat | cytosol | 66.67 | 94.34 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 66.67 | 94.34 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 66.22 | 93.71 |
| Zm00001d004138_P001 | Maize | cytosol | 52.0 | 75.48 |
| Os04t0244800-01 | Rice | plasma membrane | 51.11 | 74.19 |
| EES11880 | Sorghum | cytosol | 50.67 | 73.55 |
| Bra009662.1-P | Field mustard | cytosol | 38.67 | 71.9 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 48.44 | 70.32 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 48.0 | 69.68 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 48.0 | 67.92 |
| CDX88005 | Canola | cytosol | 43.56 | 67.59 |
| CDY07874 | Canola | cytosol | 43.56 | 67.59 |
| AT5G66110.1 | Thale cress | cytosol | 41.78 | 63.95 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 43.56 | 63.23 |
| AT4G38580.1 | Thale cress | cytosol | 42.22 | 62.09 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 33.33 | 61.98 |
| KRH60697 | Soybean | cytosol | 42.22 | 61.69 |
| CDY65011 | Canola | cytosol | 41.78 | 61.44 |
| CDY12089 | Canola | cytosol | 41.78 | 61.44 |
| CDX90282 | Canola | cytosol | 41.78 | 61.44 |
| Bra010738.1-P | Field mustard | cytosol | 41.78 | 61.44 |
| Bra033570.1-P | Field mustard | cytosol | 41.78 | 61.44 |
| PGSC0003DMT400009390 | Potato | cytosol | 43.11 | 61.01 |
| Solyc02g083550.1.1 | Tomato | cytosol | 42.67 | 60.38 |
| CDX72748 | Canola | cytosol | 40.89 | 60.13 |
| Solyc01g111600.2.1 | Tomato | nucleus | 40.44 | 59.48 |
| PGSC0003DMT400015784 | Potato | cytosol | 40.44 | 59.48 |
| KRH29001 | Soybean | cytosol | 40.44 | 58.33 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 40.0 | 56.25 |
| Bra011581.1-P | Field mustard | cytosol | 36.0 | 52.94 |
| CDX69108 | Canola | cytosol | 36.0 | 52.94 |
| AT4G35060.1 | Thale cress | cytosol | 36.0 | 52.94 |
| CDY52653 | Canola | cytosol | 36.0 | 52.94 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 35.11 | 51.97 |
| Bra034669.1-P | Field mustard | cytosol | 35.11 | 51.3 |
| CDX76309 | Canola | cytosol | 35.11 | 51.3 |
| CDY17504 | Canola | cytosol | 34.67 | 50.65 |
| HORVU5Hr1G057730.1 | Barley | cytosol | 34.67 | 48.45 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 31.11 | 46.36 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 17.33 | 45.35 |
| HORVU4Hr1G017070.3 | Barley | cytosol | 30.67 | 40.59 |
| KRH28829 | Soybean | cytosol | 21.33 | 39.67 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 22.22 | 32.26 |
| HORVU3Hr1G072940.2 | Barley | cytosol | 18.67 | 26.75 |
| HORVU7Hr1G080490.1 | Barley | cytosol | 20.0 | 26.01 |
| HORVU6Hr1G066220.1 | Barley | cytosol | 17.78 | 21.62 |
| HORVU4Hr1G085090.2 | Barley | plastid | 21.33 | 16.78 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | UniProt:A0A287T8S7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030001 | GO:GO:0046872 |
| InterPro:HMA_dom | InterPro:HMA_dom_sf | EnsemblPlantsGene:HORVU6Hr1G009000 | EnsemblPlants:HORVU6Hr1G009000.1 | InterPro:IPR006121 | PFAM:PF00403 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF168 | SUPFAM:SSF55008 | TMHMM:TMhelix | UniParc:UPI000B480CAC | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:+:16233252..16234396
Molecular Weight (calculated)
25026.7 Da
IEP (calculated)
10.057
GRAVY (calculated)
-0.256
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: HTPDPSRSPY HLPTRTFPTR RRPPVHPPAY ISLLLLLLHS FSAQLVVLLN LLRAQLCLPV DLEVVGMGIL DAVTEMCACP RVRARRRMKK RPQLETVEMK
101: VRIDCEGCER RIRKAVDGVR GVTGVEVLPK QNKVAVTGYI DDPARLMRRV ARKTGKKVEP WPYVPYDVVP HPYAPGAYDK KAPPGYVRNV VADPDAAPLA
201: RASSAEVKYT SAFSDENPNA ACAVM
101: VRIDCEGCER RIRKAVDGVR GVTGVEVLPK QNKVAVTGYI DDPARLMRRV ARKTGKKVEP WPYVPYDVVP HPYAPGAYDK KAPPGYVRNV VADPDAAPLA
201: RASSAEVKYT SAFSDENPNA ACAVM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.