Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52653 | Canola | cytosol | 94.77 | 94.77 |
| Bra011581.1-P | Field mustard | cytosol | 94.77 | 94.77 |
| CDY17504 | Canola | cytosol | 94.77 | 94.16 |
| CDX76309 | Canola | cytosol | 94.77 | 94.16 |
| Bra034669.1-P | Field mustard | cytosol | 94.77 | 94.16 |
| CDX69108 | Canola | cytosol | 94.12 | 94.12 |
| KRH60697 | Soybean | cytosol | 75.82 | 75.32 |
| AT4G38580.1 | Thale cress | cytosol | 74.51 | 74.51 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 71.9 | 70.97 |
| PGSC0003DMT400015784 | Potato | cytosol | 69.93 | 69.93 |
| Solyc01g111600.2.1 | Tomato | nucleus | 69.28 | 69.28 |
| KRH29001 | Soybean | cytosol | 68.63 | 67.31 |
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 61.44 | 60.65 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 61.44 | 60.65 |
| TraesCS2D01G063000.1 | Wheat | cytosol, plastid | 61.44 | 60.65 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 60.13 | 59.35 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 59.48 | 58.71 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 32.68 | 58.14 |
| EES11880 | Sorghum | cytosol | 58.17 | 57.42 |
| Os04t0244800-01 | Rice | plasma membrane | 57.52 | 56.77 |
| AT5G66110.1 | Thale cress | cytosol | 54.25 | 56.46 |
| Zm00001d004138_P001 | Maize | cytosol | 56.86 | 56.13 |
| TraesCS6A01G043000.1 | Wheat | cytosol | 54.25 | 52.2 |
| TraesCS6B01G059000.1 | Wheat | cytosol | 54.25 | 52.2 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 53.59 | 51.57 |
| Os03t0156600-01 | Rice | cytosol | 51.63 | 50.97 |
| EER92834 | Sorghum | cytosol | 50.98 | 50.0 |
| TraesCS7B01G285400.1 | Wheat | mitochondrion, plastid | 52.29 | 49.69 |
| HORVU7Hr1G090970.1 | Barley | mitochondrion | 51.63 | 49.69 |
| Zm00001d027720_P001 | Maize | cytosol | 50.33 | 49.36 |
| TraesCS7A01G382700.1 | Wheat | mitochondrion, plastid | 51.63 | 49.07 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 50.98 | 48.45 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 47.06 | 47.37 |
| AT1G22990.1 | Thale cress | cytosol | 46.41 | 46.71 |
| HORVU5Hr1G069380.2 | Barley | cytosol | 44.44 | 44.74 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 44.44 | 44.74 |
| TraesCS5A01G244000.1 | Wheat | cytosol | 44.44 | 44.74 |
| Zm00001d034978_P001 | Maize | cytosol | 43.79 | 44.37 |
| EES14354 | Sorghum | cytosol | 43.79 | 44.37 |
| TraesCS5B01G242000.1 | Wheat | cytosol | 43.79 | 44.08 |
| Os01t0507700-01 | Rice | plasma membrane | 43.14 | 43.71 |
| TraesCS2A01G287200.1 | Wheat | cytosol | 42.48 | 43.05 |
| TraesCS2B01G304100.1 | Wheat | cytosol | 42.48 | 43.05 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 42.48 | 43.05 |
| TraesCS3A01G206100.1 | Wheat | cytosol | 41.83 | 42.38 |
| Zm00001d052760_P001 | Maize | cytosol | 41.18 | 41.72 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 41.18 | 41.72 |
| HORVU3Hr1G049780.1 | Barley | cytosol | 41.18 | 41.72 |
| AT4G08570.1 | Thale cress | cytosol | 39.87 | 40.67 |
| AT5G17450.1 | Thale cress | cytosol | 39.22 | 40.27 |
| TraesCS3B01G238100.1 | Wheat | cytosol | 25.49 | 39.0 |
| AT4G39700.1 | Thale cress | cytosol | 39.22 | 37.97 |
| HORVU6Hr1G009000.1 | Barley | cytosol, plastid, vacuole | 52.94 | 36.0 |
| AT3G48970.1 | Thale cress | cytosol | 30.07 | 32.86 |
| AT1G06330.1 | Thale cress | cytosol | 30.07 | 30.67 |
| AT3G56891.1 | Thale cress | cytosol | 32.03 | 29.52 |
| AT1G29100.2 | Thale cress | cytosol | 27.45 | 28.57 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 28.1 | 27.74 |
| AT4G10465.1 | Thale cress | plastid | 30.07 | 25.14 |
| AT2G18196.1 | Thale cress | plastid | 27.45 | 23.6 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:829658 | UniProt:A0A178V323 | ProteinID:AEE86456.1 | EMBL:AK229060 |
| ArrayExpress:AT4G35060 | EnsemblPlantsGene:AT4G35060 | RefSeq:AT4G35060 | TAIR:AT4G35060 | RefSeq:AT4G35060-TAIR-G | EnsemblPlants:AT4G35060.1 |
| TAIR:AT4G35060.1 | EMBL:AY086639 | EMBL:BT024822 | ProteinID:CAA17771.1 | ProteinID:CAB80223.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019725 | GO:GO:0030001 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | Symbol:HIPP25 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | RefSeq:NP_567975.1 | UniProt:O49613 | ProteinID:OAO99764.1 | PFAM:PF00403 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF155 | SUPFAM:SSF55008 | UniParc:UPI000009FF64 |
Description
HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
Coordinates
chr4:-:16685612..16686818
Molecular Weight (calculated)
17163.3 Da
IEP (calculated)
8.316
GRAVY (calculated)
-0.388
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.