Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13354 | Canola | cytosol | 92.7 | 92.7 |
| CDX67533 | Canola | cytosol | 92.7 | 92.7 |
| Bra028528.1-P | Field mustard | cytosol | 92.7 | 92.7 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 61.24 | 76.76 |
| PGSC0003DMT400079287 | Potato | cytosol | 40.45 | 74.23 |
| KRH34236 | Soybean | cytosol | 68.54 | 68.54 |
| KRG92555 | Soybean | cytosol | 68.54 | 68.54 |
| GSMUA_Achr11P... | Banana | cytosol | 49.44 | 66.67 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 66.85 | 66.48 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 66.85 | 66.11 |
| AT4G10465.1 | Thale cress | plastid | 60.67 | 59.02 |
| Os03t0120400-01 | Rice | plastid | 60.67 | 55.96 |
| GSMUA_Achr11P... | Banana | cytosol | 56.74 | 54.59 |
| TraesCS4B01G348900.1 | Wheat | plastid | 58.43 | 53.33 |
| TraesCS4D01G343300.1 | Wheat | plastid | 58.43 | 53.33 |
| TraesCS5A01G516900.1 | Wheat | plastid | 58.43 | 53.33 |
| EER92967 | Sorghum | plastid | 57.87 | 53.09 |
| Zm00001d027405_P001 | Maize | plastid | 57.3 | 52.58 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 57.3 | 52.04 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 55.62 | 51.83 |
| Os10t0537400-00 | Rice | cytosol | 47.19 | 45.41 |
| AT5G17450.1 | Thale cress | cytosol | 33.15 | 39.6 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 43.82 | 39.59 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 43.82 | 39.59 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 43.26 | 39.49 |
| KXG39011 | Sorghum | cytosol | 46.07 | 39.42 |
| HORVU4Hr1G085090.2 | Barley | plastid | 57.87 | 36.01 |
| AT1G06330.1 | Thale cress | cytosol | 30.34 | 36.0 |
| AT3G48970.1 | Thale cress | cytosol | 28.09 | 35.71 |
| AT1G22990.1 | Thale cress | cytosol | 28.65 | 33.55 |
| AT1G71050.1 | Thale cress | cytosol, nucleus, plastid | 28.65 | 33.55 |
| AT3G56891.1 | Thale cress | cytosol | 30.34 | 32.53 |
| AT1G29100.2 | Thale cress | cytosol | 26.4 | 31.97 |
| AT4G39700.1 | Thale cress | cytosol | 26.97 | 30.38 |
| AT4G38580.1 | Thale cress | cytosol | 24.16 | 28.1 |
| AT4G08570.1 | Thale cress | cytosol | 23.6 | 28.0 |
| AT4G35060.1 | Thale cress | cytosol | 23.6 | 27.45 |
| AT5G66110.1 | Thale cress | cytosol | 21.91 | 26.53 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:816334 | UniProt:A0A178VLI9 | EMBL:AC007212 | ProteinID:AEC06738.1 |
| EMBL:AK222206 | ArrayExpress:AT2G18196 | EnsemblPlantsGene:AT2G18196 | RefSeq:AT2G18196 | TAIR:AT2G18196 | RefSeq:AT2G18196-TAIR-G |
| EnsemblPlants:AT2G18196.1 | TAIR:AT2G18196.1 | EMBL:BT011716 | UniProt:F4IQG4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 |
| InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | RefSeq:NP_001324920.1 | RefSeq:NP_849973.3 | ProteinID:OAP07277.1 |
| PFAM:PF00403 | PO:PO:0000293 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | SUPFAM:SSF55008 |
| UniParc:UPI000173913A | : | : | : | : | : |
Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
Coordinates
chr2:-:7920440..7922593
Molecular Weight (calculated)
21069.3 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.606
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.