Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G18196.1 | KRG89637 | AT5G15210.1 | 18974936 |
| AT2G18196.1 | KRH50585 | AT5G15210.1 | 18974936 |
| AT2G18196.1 | KRH70724 | AT5G15210.1 | 18974936 |
| AT2G18196.1 | KRH74865 | AT5G15210.1 | 18974936 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34236 | Soybean | cytosol | 97.19 | 97.19 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 64.61 | 80.99 |
| PGSC0003DMT400079287 | Potato | cytosol | 39.89 | 73.2 |
| GSMUA_Achr11P... | Banana | cytosol | 51.12 | 68.94 |
| AT2G18196.1 | Thale cress | plastid | 68.54 | 68.54 |
| Bra028528.1-P | Field mustard | cytosol | 67.98 | 67.98 |
| CDX67533 | Canola | cytosol | 67.98 | 67.98 |
| CDY13354 | Canola | cytosol | 67.98 | 67.98 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 66.85 | 66.48 |
| AT4G10465.1 | Thale cress | plastid | 67.42 | 65.57 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 66.29 | 65.56 |
| CDX99542 | Canola | plastid | 65.73 | 64.29 |
| CDX86861 | Canola | plastid | 65.73 | 64.29 |
| CDX85985 | Canola | mitochondrion | 43.26 | 64.17 |
| Bra037919.1-P | Field mustard | plastid | 65.17 | 63.74 |
| GSMUA_Achr11P... | Banana | cytosol | 59.55 | 57.3 |
| Os03t0120400-01 | Rice | plastid | 60.11 | 55.44 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 58.43 | 54.45 |
| EER92967 | Sorghum | plastid | 58.43 | 53.61 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 58.99 | 53.57 |
| TraesCS5A01G516900.1 | Wheat | plastid | 57.87 | 52.82 |
| TraesCS4D01G343300.1 | Wheat | plastid | 57.87 | 52.82 |
| TraesCS4B01G348900.1 | Wheat | plastid | 57.87 | 52.82 |
| Zm00001d027405_P001 | Maize | plastid | 55.62 | 51.03 |
| Os10t0537400-00 | Rice | cytosol | 50.56 | 48.65 |
| KRG93769 | Soybean | cytosol | 25.28 | 46.39 |
| KRG93786 | Soybean | cytosol, plastid | 24.72 | 45.36 |
| KRH76245 | Soybean | cytosol | 21.91 | 44.32 |
| KRH15973 | Soybean | cytosol, plastid | 26.4 | 43.12 |
| KRH58951 | Soybean | cytosol | 33.71 | 42.86 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 47.19 | 42.64 |
| KRH57823 | Soybean | cytosol | 35.39 | 42.57 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 46.63 | 42.13 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 46.07 | 42.05 |
| KRG93169 | Soybean | cytosol | 33.71 | 41.67 |
| KXG39011 | Sorghum | cytosol | 48.31 | 41.35 |
| KRG90986 | Soybean | cytosol, plastid | 33.15 | 40.41 |
| KRH35768 | Soybean | cytosol, plastid | 32.58 | 39.73 |
| KRH38224 | Soybean | cytosol | 32.58 | 39.46 |
| KRH70455 | Soybean | cytosol | 31.46 | 38.62 |
| KRH01671 | Soybean | cytosol | 31.46 | 38.62 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 18.54 | 38.37 |
| KRH43240 | Soybean | cytosol | 32.02 | 37.25 |
| KRH59402 | Soybean | cytosol | 32.02 | 37.25 |
| KRH28829 | Soybean | cytosol | 25.28 | 37.19 |
| KRH38480 | Soybean | cytosol | 24.72 | 36.97 |
| KRH22286 | Soybean | cytosol | 29.21 | 36.62 |
| KRH27043 | Soybean | cytosol | 29.21 | 36.62 |
| KRH09015 | Soybean | cytosol | 28.09 | 36.23 |
| HORVU4Hr1G085090.2 | Barley | plastid | 56.74 | 35.31 |
| KRH62410 | Soybean | cytosol, plastid | 29.21 | 34.9 |
| KRH31264 | Soybean | cytosol | 30.34 | 34.84 |
| KRH53129 | Soybean | cytosol | 28.65 | 34.23 |
| KRH29001 | Soybean | cytosol | 29.78 | 33.97 |
| KRG97609 | Soybean | cytosol | 28.65 | 32.48 |
| KRH60697 | Soybean | cytosol | 27.53 | 31.82 |
| KRH38229 | Soybean | cytosol | 25.84 | 31.29 |
Protein Annotations
| EntrezGene:100788652 | Gene3D:3.30.70.100 | MapMan:35.1 | EMBL:ACUP02012761 | EnsemblPlantsGene:GLYMA_20G218500 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 |
| GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf | UniProt:I1NII5 | InterPro:IPR006121 | EnsemblPlants:KRG92555 |
| ProteinID:KRG92555 | ProteinID:KRG92555.1 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 |
| SUPFAM:SSF55008 | UniParc:UPI000233DCAF | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:45424867..45428495
Molecular Weight (calculated)
20804.0 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.648
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLQKAFG SEISSFIYRL FIYQNHNKGI PRNFKMPKKG RPLSLQTVEL KVRMCCTGCE RVVKNAIYKL KGIDSVEVDL EMERVRVGGY VDRNKVLKAV
101: RRAGKRAEFW PYPNPPLYFT SADHYFKDTT HEFKESYNYY RHGYNLPERH GTMHVSHRGD DNVSNMFNDD NVNACHIM
101: RRAGKRAEFW PYPNPPLYFT SADHYFKDTT HEFKESYNYY RHGYNLPERH GTMHVSHRGD DNVSNMFNDD NVNACHIM
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.