Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028528.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY13354 | Canola | cytosol | 100.0 | 100.0 |
| AT2G18196.1 | Thale cress | plastid | 92.7 | 92.7 |
| VIT_02s0025g03010.t01 | Wine grape | cytosol, mitochondrion | 61.8 | 77.46 |
| PGSC0003DMT400079287 | Potato | cytosol | 39.89 | 73.2 |
| KRG92555 | Soybean | cytosol | 67.98 | 67.98 |
| GSMUA_Achr11P... | Banana | cytosol | 50.0 | 67.42 |
| KRH34236 | Soybean | cytosol | 67.42 | 67.42 |
| Solyc08g075880.2.1 | Tomato | endoplasmic reticulum, plastid | 64.61 | 64.25 |
| PGSC0003DMT400079324 | Potato | endoplasmic reticulum | 64.61 | 63.89 |
| CDX86861 | Canola | plastid | 62.92 | 61.54 |
| CDX99542 | Canola | plastid | 62.92 | 61.54 |
| CDX85985 | Canola | mitochondrion | 39.89 | 59.17 |
| GSMUA_Achr11P... | Banana | cytosol | 58.99 | 56.76 |
| Os03t0120400-01 | Rice | plastid | 60.67 | 55.96 |
| TraesCS4B01G348900.1 | Wheat | plastid | 59.55 | 54.36 |
| TraesCS4D01G343300.1 | Wheat | plastid | 59.55 | 54.36 |
| TraesCS5A01G516900.1 | Wheat | plastid | 59.55 | 54.36 |
| GSMUA_Achr1P00790_001 | Banana | cytosol | 58.43 | 53.06 |
| GSMUA_Achr2P10220_001 | Banana | mitochondrion, plastid | 56.74 | 52.88 |
| EER92967 | Sorghum | plastid | 57.3 | 52.58 |
| Zm00001d027405_P001 | Maize | plastid | 55.62 | 51.03 |
| Os10t0537400-00 | Rice | cytosol | 46.63 | 44.86 |
| KXG39011 | Sorghum | cytosol | 46.63 | 39.9 |
| TraesCS1B01G215100.1 | Wheat | cytosol, plastid | 43.26 | 39.09 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 43.26 | 39.09 |
| TraesCS1A01G200700.1 | Wheat | cytosol, plastid | 42.7 | 38.97 |
| CDX85452 | Canola | cytosol | 32.58 | 38.93 |
| CDY55938 | Canola | cytosol | 32.58 | 38.93 |
| CDY38431 | Canola | cytosol | 31.46 | 37.58 |
| CDY16919 | Canola | cytosol | 30.9 | 36.91 |
| HORVU4Hr1G085090.2 | Barley | plastid | 58.99 | 36.71 |
| CDY08096 | Canola | cytosol | 28.09 | 36.23 |
| CDY05886 | Canola | cytosol | 28.09 | 36.23 |
| CDX72773 | Canola | cytosol | 30.34 | 36.0 |
| CDX96299 | Canola | cytosol | 30.34 | 36.0 |
| CDY47384 | Canola | cytosol, extracellular | 31.46 | 35.22 |
| CDX76017 | Canola | cytosol | 30.9 | 34.81 |
| CDX72102 | Canola | cytosol | 30.9 | 34.81 |
| CDY27183 | Canola | cytosol | 30.9 | 34.81 |
| CDY04750 | Canola | cytosol | 29.21 | 33.99 |
| CDY21408 | Canola | cytosol | 29.21 | 33.99 |
| CDY06206 | Canola | cytosol | 28.65 | 33.77 |
| CDY42647 | Canola | cytosol | 29.78 | 33.54 |
| CDY41999 | Canola | cytosol | 29.78 | 33.54 |
| CDX86196 | Canola | cytosol | 29.78 | 33.54 |
| CDY12499 | Canola | cytosol | 28.65 | 33.33 |
| CDY25762 | Canola | cytosol | 28.65 | 33.33 |
| CDX94648 | Canola | cytosol | 25.84 | 32.62 |
| CDY57455 | Canola | cytosol | 25.84 | 32.62 |
| CDX75144 | Canola | cytosol | 22.47 | 31.75 |
| CDX90282 | Canola | cytosol | 25.84 | 30.07 |
| CDX72748 | Canola | cytosol | 25.84 | 30.07 |
| CDY65011 | Canola | cytosol | 25.84 | 30.07 |
| CDY12089 | Canola | cytosol | 25.84 | 30.07 |
| CDY36193 | Canola | cytosol | 24.72 | 29.33 |
| CDX69108 | Canola | cytosol | 23.6 | 27.45 |
| CDY52653 | Canola | cytosol | 23.6 | 27.45 |
| CDY17504 | Canola | cytosol | 23.03 | 26.62 |
| CDX88005 | Canola | cytosol | 21.35 | 26.21 |
| CDY07874 | Canola | cytosol | 21.35 | 26.21 |
| CDX76309 | Canola | cytosol | 22.47 | 25.97 |
| CDY09978 | Canola | cytosol | 32.58 | 19.86 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078BX48 | UniProt:A0A078BX48 | EnsemblPlants:CDX67533 | ProteinID:CDX67533 |
| ProteinID:CDX67533.1 | ProteinID:CDY13354.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00098661001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF280 | SUPFAM:SSF55008 | UniParc:UPI00025433FF |
Description
BnaA07g15730DBnaA07g15730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078BX48]
Coordinates
chrLK031787:-:795176..796867
Molecular Weight (calculated)
20938.2 Da
IEP (calculated)
10.037
GRAVY (calculated)
-0.611
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRSIISTI TYGLFLGYPH KKPKVKSVSH LNYYHTMPKA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL ELERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GHIHVTNRGD DKVSNFFNDD NVHACRLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GHIHVTNRGD DKVSNFFNDD NVHACRLM
001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM
Arabidopsis Description
HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.