Factsheet for Zm00001d027405_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005757_P001
Zm00001d020460_P001
Zm00001d032175_P001
Zm00001d050443_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18196.1	Zm00001d005757_P001	AT5G15210.1	18974936
AT2G18196.1	Zm00001d020460_P001	AT5G15210.1	18974936
AT2G18196.1	Zm00001d032175_P001	AT5G15210.1	18974936
AT2G18196.1	Zm00001d050443_P001	AT5G15210.1	18974936

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92967	Sorghum	plastid	93.81	93.81
Os03t0120400-01	Rice	plastid	81.44	81.87
GSMUA_Achr11P...	Banana	cytosol	55.15	81.06
TraesCS4B01G348900.1	Wheat	plastid	81.44	81.03
TraesCS5A01G516900.1	Wheat	plastid	80.41	80.0
TraesCS4D01G343300.1	Wheat	plastid	80.41	80.0
VIT_02s0025g03010.t01	Wine grape	cytosol, mitochondrion	50.0	68.31
PGSC0003DMT400079287	Potato	cytosol	33.51	67.01
GSMUA_Achr11P...	Banana	cytosol	58.76	61.62
GSMUA_Achr1P00790_001	Banana	cytosol	61.34	60.71
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	58.76	59.69
Solyc08g075880.2.1	Tomato	endoplasmic reticulum, plastid	54.12	58.66
PGSC0003DMT400079324	Potato	endoplasmic reticulum	54.12	58.33
AT2G18196.1	Thale cress	plastid	52.58	57.3
KRH34236	Soybean	cytosol	52.06	56.74
CDY13354	Canola	cytosol	51.03	55.62
KRG92555	Soybean	cytosol	51.03	55.62
CDX67533	Canola	cytosol	51.03	55.62
Bra028528.1-P	Field mustard	cytosol	51.03	55.62
HORVU4Hr1G085090.2	Barley	plastid	80.41	54.55
PGSC0003DMT400012844	Potato	plastid	49.48	52.17
CDX99542	Canola	plastid	48.45	51.65
CDX86861	Canola	plastid	48.45	51.65
Bra037919.1-P	Field mustard	plastid	48.45	51.65
AT4G10465.1	Thale cress	plastid	47.94	50.82
CDX85985	Canola	mitochondrion	29.9	48.33
Zm00001d051472_P001	Maize	mitochondrion	31.96	41.33
Zm00001d052760_P001	Maize	cytosol	30.41	39.07
Zm00001d005656_P001	Maize	mitochondrion	31.44	37.89
Zm00001d034978_P001	Maize	cytosol	28.87	37.09
Zm00001d004138_P001	Maize	cytosol	28.35	35.48
Zm00001d032291_P001	Maize	cytosol	25.77	34.72
Zm00001d020257_P001	Maize	cytosol	28.87	34.57
Zm00001d027720_P001	Maize	cytosol	26.29	32.69
Zm00001d043403_P001	Maize	cytosol	25.26	31.61
Zm00001d018075_P001	Maize	mitochondrion	27.32	28.65
Zm00001d046169_P001	Maize	cytosol	23.71	25.41

Protein Annotations

EnsemblPlants:Zm00001d027405_P001	EnsemblPlants:Zm00001d027405_T001	EnsemblPlantsGene:Zm00001d027405	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF141	PFAM:PF00403	PFscan:PS50846	ProteinID:ONL93061.1
SignalP:SignalP-noTM	SUPFAM:SSF55008	UniParc:UPI000221CC24	UniProt:A0A1D6JLS3	MapMan:35.1	:

Description

heavy metal associated1

Coordinates

chr1:-:4536701..4538190

Molecular Weight (calculated)

22090.9 Da

IEP (calculated)

8.290

GRAVY (calculated)

-0.656

Length

194 amino acids

Sequence
(BLAST)

001: MSSVSSSLTN FLLCCFYPSS AGHHRGGAYY YSSHPTSAST LHYHEGTFAG RRAMGRSSRP LSLQTVELKV RMCCSGCERV VKHAVTRLRG VDSVEVDVEM
101: EKVTVTGYVD RHRVLKEVRR AGKKAEFWPN PDLPMHFTCA KDYFHDEESY RRTYNYYRHG YNGDKHGQLH EPHRGADPVS NMFNDDDVNA CSVM

Best Arabidopsis Sequence Match ( AT2G18196.1 )
(BLAST)

001: MGFGSFISTI TYCLFFRYPH KKPKFKSVSH LNHYHTMPMA RPLSLQTIDL KVRMCCSGCE RVVKHAIYKL RGVDSVEVNL EMERVTVVGY VERKKVLKAV
101: RRAGKRAEFW PYPDMPRYFT SSDHYFKDTT REFRESYNYY RHGYNLSDRH GNIHVTNRGD DKMSNFFNDD NVHACSLM

Arabidopsis Description

HIPP30Heavy metal-associated isoprenylated plant protein 30 [Source:UniProtKB/Swiss-Prot;Acc:F4IQG4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.