Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005757_P001 | Maize | nucleus | 84.32 | 86.43 |
| KXG35632 | Sorghum | nucleus | 88.38 | 85.83 |
| TraesCS5A01G227100.1 | Wheat | nucleus | 63.51 | 61.36 |
| HORVU5Hr1G065740.1 | Barley | nucleus | 63.24 | 60.62 |
| TraesCS5B01G225700.1 | Wheat | nucleus | 63.78 | 60.51 |
| TraesCS5D01G234600.1 | Wheat | nucleus | 63.24 | 60.47 |
| Zm00001d032175_P001 | Maize | cytosol | 48.92 | 48.53 |
| Zm00001d050443_P001 | Maize | nucleus | 46.22 | 46.72 |
| TraesCS3A01G308700.1 | Wheat | nucleus | 21.89 | 43.78 |
| Zm00001d052395_P001 | Maize | plastid | 10.0 | 43.02 |
| TraesCS1D01G064300.1 | Wheat | mitochondrion | 19.46 | 41.62 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 25.41 | 40.87 |
| AT5G15210.1 | Thale cress | nucleus | 29.73 | 40.59 |
| Zm00001d023286_P001 | Maize | cytosol | 10.54 | 39.8 |
| Zm00001d023289_P001 | Maize | cytosol | 10.54 | 39.8 |
| PGSC0003DMT400080288 | Potato | nucleus | 30.81 | 39.72 |
| Bra008712.1-P | Field mustard | cytosol | 27.84 | 39.16 |
| Solyc05g007580.1.1 | Tomato | nucleus | 31.35 | 39.06 |
| CDX69541 | Canola | nucleus | 27.57 | 38.78 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 10.27 | 38.0 |
| HORVU1Hr1G013140.1 | Barley | cytosol | 7.57 | 37.33 |
| KRH70724 | Soybean | nucleus | 29.19 | 37.11 |
| KRH74865 | Soybean | nucleus | 28.92 | 36.15 |
| CDX85059 | Canola | nucleus | 22.97 | 35.71 |
| TraesCS1A01G087700.1 | Wheat | nucleus | 27.03 | 34.97 |
| Zm00001d009674_P001 | Maize | nucleus | 22.43 | 34.73 |
| TraesCS1B01G106800.1 | Wheat | nucleus | 27.03 | 34.48 |
| Zm00001d013409_P001 | Maize | cytosol, mitochondrion, nucleus | 20.81 | 32.08 |
| Zm00001d020774_P001 | Maize | nucleus | 23.51 | 31.87 |
| KRG89637 | Soybean | nucleus | 15.68 | 31.87 |
| Zm00001d033791_P001 | Maize | cytosol, mitochondrion, nucleus | 19.73 | 31.6 |
| Zm00001d003645_P001 | Maize | nucleus | 25.41 | 31.33 |
| KRH50585 | Soybean | nucleus | 28.92 | 29.89 |
| Zm00001d020459_P001 | Maize | mitochondrion | 8.92 | 29.73 |
| Zm00001d032177_P001 | Maize | mitochondrion | 9.46 | 29.41 |
| Zm00001d005931_P001 | Maize | nucleus | 22.43 | 29.02 |
| Zm00001d050452_P001 | Maize | mitochondrion | 9.73 | 28.35 |
| Zm00001d031840_P001 | Maize | nucleus | 23.24 | 27.92 |
| Zm00001d041780_P001 | Maize | nucleus | 24.32 | 25.79 |
| Zm00001d049000_P001 | Maize | plastid | 24.59 | 21.67 |
| Zm00001d017784_P001 | Maize | nucleus | 22.97 | 20.38 |
| Zm00001d051573_P001 | Maize | nucleus | 24.05 | 19.96 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100279452 | MapMan:15.5.3.13 | UniProt:B6TFI1 | EMBL:BT063244 | EMBL:EU963746 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD |
| InterPro:IPR006456 | ProteinID:ONM54964.1 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF48 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI000182E526 | InterPro:ZF_HD_homeobox_Cys/His_dimer |
| EnsemblPlantsGene:Zm00001d020460 | EnsemblPlants:Zm00001d020460_P001 | EnsemblPlants:Zm00001d020460_T001 | SEG:seg | : | : |
Description
ZF-HD-transcription factor 2Zinc-finger homeodomain protein 8
Coordinates
chr7:-:116166449..116167561
Molecular Weight (calculated)
38613.4 Da
IEP (calculated)
8.184
GRAVY (calculated)
-0.524
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAMDVKYKP VMFPNGAGLK KPKPAAAVAL AGEPLYRECL KNHAASLGGH AVDGCGEFMP SPGANPADPT SLKCAACGCH RNFHRRTLEG SPPPPAPAPL
101: ALPPPPSVMH GQPHRAREET PEDRHPGVVD ADDSDSDSEG SEYDEERSVS PPPPPHHLLP APVAQQPPPP SYFPTAPHMV LSLGSGVPGP AVAVSPAQRL
201: APTQLTPSSA PPHAGGAMPM PRKRFRTKFT AEQKQRMQEL SERLGWRLQK RDEAIVDEWC RDIGVGKGVF KVWMHNNKHN FLGGHSARRS ASSPAPAPAA
301: ASLQTPAAGA GAAAAPSFHP SRITPPPPVL TSSPTAATGF NINGAASSAP TVATDYTTDN ANGASSPHSA
101: ALPPPPSVMH GQPHRAREET PEDRHPGVVD ADDSDSDSEG SEYDEERSVS PPPPPHHLLP APVAQQPPPP SYFPTAPHMV LSLGSGVPGP AVAVSPAQRL
201: APTQLTPSSA PPHAGGAMPM PRKRFRTKFT AEQKQRMQEL SERLGWRLQK RDEAIVDEWC RDIGVGKGVF KVWMHNNKHN FLGGHSARRS ASSPAPAPAA
301: ASLQTPAAGA GAAAAPSFHP SRITPPPPVL TSSPTAATGF NINGAASSAP TVATDYTTDN ANGASSPHSA
001: MDLSSKPQQQ LLNSLPIAGE LTVTGEMGVC YKECLKNHAA NLGGHALDGC GEFMPSPTAT STDPSSLRCA ACGCHRNFHR RDPSENLNFL TAPPISSPSG
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
101: TESPPSRHVS SPVPCSYYTS APPHHVILSL SSGFPGPSDQ DPTVVRSENS SRGAMRKRTR TKFTPEQKIK MRAFAEKAGW KINGCDEKSV REFCNEVGIE
201: RGVLKVWMHN NKYSLLNGKI REIEHGLCLN THSNDGDGSS SS
Arabidopsis Description
ZHD11Zinc-finger homeodomain protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.