Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020774_P001 | Maize | nucleus | 76.57 | 80.22 |
| EER96888 | Sorghum | nucleus | 76.57 | 72.52 |
| Os09t0466400-01 | Rice | nucleus | 69.58 | 71.33 |
| TraesCS5D01G253100.1 | Wheat | nucleus | 69.23 | 66.89 |
| TraesCS5B01G243800.1 | Wheat | nucleus | 68.88 | 66.33 |
| Zm00001d031840_P001 | Maize | nucleus | 71.33 | 66.23 |
| TraesCS5A01G246500.1 | Wheat | nucleus | 68.53 | 65.99 |
| VIT_18s0001g07140.t01 | Wine grape | nucleus | 52.8 | 65.65 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 68.18 | 64.57 |
| GSMUA_Achr5P05500_001 | Banana | nucleus | 52.8 | 63.45 |
| Solyc04g074990.2.1 | Tomato | nucleus | 31.12 | 62.24 |
| PGSC0003DMT400084919 | Potato | nucleus | 36.01 | 58.86 |
| Solyc05g051420.1.1 | Tomato | nucleus | 34.27 | 58.68 |
| VIT_00s0199g00250.t01 | Wine grape | nucleus | 48.6 | 56.97 |
| KRH45571 | Soybean | cytosol, nucleus | 37.76 | 55.38 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 28.32 | 55.1 |
| KRH45572 | Soybean | nucleus | 38.11 | 55.05 |
| KRH45573 | Soybean | nucleus | 38.11 | 55.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.9 | 54.8 |
| KRH74513 | Soybean | nucleus | 47.9 | 53.94 |
| PGSC0003DMT400033624 | Potato | nucleus | 44.41 | 52.92 |
| KRG99446 | Soybean | nucleus | 46.15 | 52.8 |
| Solyc04g014260.1.1 | Tomato | nucleus | 40.21 | 46.56 |
| PGSC0003DMT400060623 | Potato | nucleus | 39.51 | 46.5 |
| KRG90132 | Soybean | cytosol | 33.22 | 46.34 |
| KRH45574 | Soybean | cytosol | 41.96 | 45.98 |
| KRG90215 | Soybean | cytosol | 33.92 | 45.75 |
| Zm00001d052395_P001 | Maize | plastid | 13.64 | 45.35 |
| KRH69650 | Soybean | nucleus | 46.5 | 45.08 |
| Zm00001d023289_P001 | Maize | cytosol | 14.69 | 42.86 |
| Zm00001d023286_P001 | Maize | cytosol | 14.69 | 42.86 |
| CDY54719 | Canola | nucleus | 35.66 | 42.32 |
| Bra037816.1-P | Field mustard | nucleus | 35.31 | 41.74 |
| KRH71953 | Soybean | nucleus | 36.71 | 41.02 |
| KRG90210 | Soybean | nucleus | 36.71 | 41.02 |
| CDX81284 | Canola | nucleus | 36.36 | 40.78 |
| CDY33960 | Canola | nucleus | 38.11 | 40.52 |
| CDY37827 | Canola | nucleus | 38.46 | 40.44 |
| Bra031859.1-P | Field mustard | nucleus | 38.46 | 40.44 |
| AT5G65410.1 | Thale cress | nucleus | 38.81 | 39.78 |
| KRH71954 | Soybean | nucleus | 34.27 | 39.68 |
| KRG90213 | Soybean | nucleus | 35.31 | 39.61 |
| KRG90211 | Soybean | cytosol | 35.31 | 39.3 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 13.64 | 39.0 |
| Bra024382.1-P | Field mustard | nucleus | 39.51 | 38.57 |
| CDY14559 | Canola | nucleus | 39.51 | 38.57 |
| Zm00001d032177_P001 | Maize | mitochondrion | 15.38 | 36.97 |
| Zm00001d009674_P001 | Maize | nucleus | 29.37 | 35.15 |
| Zm00001d050452_P001 | Maize | mitochondrion | 15.38 | 34.65 |
| Zm00001d041780_P001 | Maize | nucleus | 41.26 | 33.81 |
| Zm00001d020459_P001 | Maize | mitochondrion | 12.94 | 33.33 |
| Zm00001d049000_P001 | Maize | plastid | 42.66 | 29.05 |
| Zm00001d033791_P001 | Maize | cytosol, mitochondrion, nucleus | 22.73 | 28.14 |
| Zm00001d003645_P001 | Maize | nucleus | 29.37 | 28.0 |
| Zm00001d013409_P001 | Maize | cytosol, mitochondrion, nucleus | 23.43 | 27.92 |
| Zm00001d032175_P001 | Maize | cytosol | 31.12 | 23.86 |
| Zm00001d050443_P001 | Maize | nucleus | 30.07 | 23.5 |
| Zm00001d017784_P001 | Maize | nucleus | 33.92 | 23.26 |
| Zm00001d005757_P001 | Maize | nucleus | 28.67 | 22.71 |
| Zm00001d020460_P001 | Maize | nucleus | 29.02 | 22.43 |
| Zm00001d051573_P001 | Maize | nucleus | 33.57 | 21.52 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | UniProt:A0A1D6ERL7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | ProteinID:ONM22381.1 | PFAM:PD125774 |
| PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF25 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | UniParc:UPI0002213DAA | InterPro:ZF_HD_homeobox_Cys/His_dimer | EnsemblPlantsGene:Zm00001d005931 | EnsemblPlants:Zm00001d005931_P001 | EnsemblPlants:Zm00001d005931_T001 |
| SEG:seg | : | : | : | : | : |
Description
ZF-HD-transcription factor 16Zinc-finger homeodomain protein 2
Coordinates
chr2:-:193254454..193255314
Molecular Weight (calculated)
29914.4 Da
IEP (calculated)
7.427
GRAVY (calculated)
-0.485
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDDHDDSD EEMAPMPMPM PMPVSSSYDA PPLAAGFGGG GVEPLSVRAK APAGGLGGGG GGGGRYRECL KNHAVGIGGH AVDGCGEFMP AGEEGTLGAL
101: RCAACGCHRN FHRKEPAAGS LVSPAALAAY GSAAPHHHHF SPYCRTPAGY FHQQPLQMAP PVPVGHTPRP LALPSTSHGW RDDGDGDDDF SGMAGPLSSA
201: VGPLGGMSLG GTTGPSGSGG SGKKRFRTKF SQEQKDRMLA FAERVGWRVQ KHDEAAVQQF CDEVCVKRHV LKVWMHNNKH TLGKKP
101: RCAACGCHRN FHRKEPAAGS LVSPAALAAY GSAAPHHHHF SPYCRTPAGY FHQQPLQMAP PVPVGHTPRP LALPSTSHGW RDDGDGDDDF SGMAGPLSSA
201: VGPLGGMSLG GTTGPSGSGG SGKKRFRTKF SQEQKDRMLA FAERVGWRVQ KHDEAAVQQF CDEVCVKRHV LKVWMHNNKH TLGKKP
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.