Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74513 | Soybean | nucleus | 76.27 | 88.58 |
| Solyc04g074990.2.1 | Tomato | nucleus | 32.54 | 67.13 |
| VIT_00s0199g00250.t01 | Wine grape | nucleus | 55.25 | 66.8 |
| Solyc05g051420.1.1 | Tomato | nucleus | 35.59 | 62.87 |
| KRG99446 | Soybean | nucleus | 51.19 | 60.4 |
| PGSC0003DMT400084919 | Potato | nucleus | 35.59 | 60.0 |
| KRH45571 | Soybean | cytosol, nucleus | 39.66 | 60.0 |
| KRH45572 | Soybean | nucleus | 40.0 | 59.6 |
| GSMUA_Achr7P19060_001 | Banana | nucleus | 41.02 | 58.74 |
| KRH45573 | Soybean | nucleus | 39.32 | 58.59 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 28.47 | 57.14 |
| PGSC0003DMT400060623 | Potato | nucleus | 46.44 | 56.38 |
| GSMUA_Achr5P05500_001 | Banana | nucleus | 44.41 | 55.04 |
| PGSC0003DMT400033624 | Potato | nucleus | 44.75 | 55.0 |
| Solyc04g014260.1.1 | Tomato | nucleus | 45.76 | 54.66 |
| GSMUA_Achr3P20390_001 | Banana | nucleus | 38.31 | 54.59 |
| KRH16820 | Soybean | nucleus | 46.78 | 53.08 |
| GSMUA_Achr6P02170_001 | Banana | nucleus | 41.36 | 52.81 |
| KRG90132 | Soybean | cytosol | 36.61 | 52.68 |
| GSMUA_Achr10P... | Banana | nucleus | 40.68 | 52.4 |
| Os09t0466400-01 | Rice | nucleus | 48.47 | 51.25 |
| Zm00001d020774_P001 | Maize | nucleus | 46.78 | 50.55 |
| KRG90215 | Soybean | cytosol | 35.59 | 49.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.69 | 49.2 |
| KRH45574 | Soybean | cytosol | 43.39 | 49.04 |
| Os08t0479400-01 | Rice | nucleus | 48.14 | 48.97 |
| KRG92484 | Soybean | nucleus | 31.53 | 48.95 |
| KRH72430 | Soybean | nucleus | 44.75 | 48.89 |
| EER96888 | Sorghum | nucleus | 48.47 | 47.35 |
| TraesCS5D01G253100.1 | Wheat | nucleus | 47.46 | 47.3 |
| KRH03476 | Soybean | cytosol | 12.54 | 46.84 |
| KRH56913 | Soybean | cytosol | 12.54 | 46.84 |
| TraesCS5B01G243800.1 | Wheat | nucleus | 47.12 | 46.8 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 47.8 | 46.69 |
| Zm00001d005931_P001 | Maize | nucleus | 45.08 | 46.5 |
| KRH71953 | Soybean | nucleus | 40.34 | 46.48 |
| TraesCS5A01G246500.1 | Wheat | nucleus | 46.78 | 46.46 |
| KRG90213 | Soybean | nucleus | 40.0 | 46.27 |
| Zm00001d031840_P001 | Maize | nucleus | 48.14 | 46.1 |
| KRG90210 | Soybean | nucleus | 40.0 | 46.09 |
| KRH62204 | Soybean | nucleus | 45.42 | 45.73 |
| EES15144 | Sorghum | nucleus | 48.14 | 45.66 |
| KRG90211 | Soybean | cytosol | 39.66 | 45.53 |
| KRH52923 | Soybean | nucleus | 45.76 | 45.3 |
| KRH41884 | Soybean | nucleus | 22.71 | 44.08 |
| KRH01145 | Soybean | cytosol | 11.19 | 44.0 |
| KRH18477 | Soybean | cytosol, mitochondrion | 12.2 | 43.9 |
| KRH63346 | Soybean | cytosol, mitochondrion | 13.22 | 43.82 |
| KRH54551 | Soybean | cytosol, mitochondrion | 13.22 | 43.82 |
| KRH60587 | Soybean | nucleus | 22.37 | 43.42 |
| CDY54719 | Canola | nucleus | 35.25 | 43.15 |
| Bra037816.1-P | Field mustard | nucleus | 34.92 | 42.56 |
| KRH71954 | Soybean | nucleus | 35.59 | 42.51 |
| CDX81284 | Canola | nucleus | 36.27 | 41.96 |
| KRG93529 | Soybean | cytosol, mitochondrion | 13.56 | 41.24 |
| KRH40102 | Soybean | cytosol, mitochondrion | 10.17 | 41.1 |
| CDY33960 | Canola | nucleus | 36.95 | 40.52 |
| AT5G65410.1 | Thale cress | nucleus | 37.97 | 40.14 |
| Bra031859.1-P | Field mustard | nucleus | 36.95 | 40.07 |
| CDY37827 | Canola | nucleus | 36.95 | 40.07 |
| KRH40100 | Soybean | mitochondrion | 12.88 | 39.58 |
| Bra024382.1-P | Field mustard | nucleus | 37.97 | 38.23 |
| CDY14559 | Canola | nucleus | 37.97 | 38.23 |
| KRH51275 | Soybean | nucleus | 36.61 | 38.16 |
| KRH01880 | Soybean | nucleus | 36.27 | 37.41 |
| KRH01146 | Soybean | cytosol | 11.53 | 34.69 |
| KRH48720 | Soybean | nucleus | 24.41 | 33.03 |
| KRH40101 | Soybean | mitochondrion | 10.85 | 32.99 |
| KRH38989 | Soybean | nucleus, plastid | 25.08 | 32.31 |
| KRH01171 | Soybean | mitochondrion | 9.49 | 31.82 |
| KRH44088 | Soybean | nucleus | 15.25 | 30.82 |
| KRH76785 | Soybean | nucleus | 32.54 | 30.28 |
| KRH74865 | Soybean | nucleus | 28.81 | 28.72 |
| KRH28682 | Soybean | nucleus | 32.54 | 28.57 |
| KRH26349 | Soybean | nucleus | 15.59 | 28.4 |
| KRH70724 | Soybean | nucleus | 27.8 | 28.18 |
| KRH69909 | Soybean | nucleus | 31.86 | 28.14 |
| KRH18475 | Soybean | nucleus | 30.85 | 27.49 |
| KRH08258 | Soybean | nucleus | 30.51 | 27.36 |
| KRH01172 | Soybean | nucleus | 30.51 | 26.63 |
| KRH40099 | Soybean | nucleus, plastid | 26.78 | 25.65 |
| KRH50585 | Soybean | nucleus | 30.17 | 24.86 |
| KRH26348 | Soybean | nucleus | 15.59 | 24.21 |
| KRH26296 | Soybean | nucleus | 15.59 | 23.23 |
| KRG89637 | Soybean | nucleus | 13.56 | 21.98 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100808910 | MapMan:15.5.3.13 | EMBL:ACUP02000726 | ncoils:Coil | EnsemblPlantsGene:GLYMA_02G040100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD |
| InterPro:IPR006456 | UniProt:K7K6C7 | EnsemblPlants:KRH69650 | ProteinID:KRH69650 | ProteinID:KRH69650.1 | PFAM:PD125774 |
| PFAM:PF04770 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF44 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | UniParc:UPI00029683E1 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:+:3776461..3777774
Molecular Weight (calculated)
32643.4 Da
IEP (calculated)
7.875
GRAVY (calculated)
-0.822
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEYTFGQRK HEGTERETLR EREYETPTTR ISQNLLNSIE KLTKLKEFRE MEFEDQEEQE EELCMGGGGA GYDPTRMKVP VAAEPVRSTN GGGGRARYRE
101: CLKNHAVGIG GHALDGCGEF MAAGMEGTLD ALKCAACSCH RNFHRKEADS SAVVAFSGGD PYLIPHHHPP PQFAAYYRHP AGYLHVAGQQ HRSAVGGTLA
201: LPSTSGGGGT QSTREDQEDI SNNPSAGGTG SKKRFRTKFT VEQKEKMLEL AEKLGWRIQK QDEAVVQAFC NETGVKRHVL KVWMHNNKHT LGKKP
101: CLKNHAVGIG GHALDGCGEF MAAGMEGTLD ALKCAACSCH RNFHRKEADS SAVVAFSGGD PYLIPHHHPP PQFAAYYRHP AGYLHVAGQQ HRSAVGGTLA
201: LPSTSGGGGT QSTREDQEDI SNNPSAGGTG SKKRFRTKFT VEQKEKMLEL AEKLGWRIQK QDEAVVQAFC NETGVKRHVL KVWMHNNKHT LGKKP
001: MEFEDNNNNN DEEQEEDMNL HEEEEDDDAV YDSPPLSRVL PKASTESHET TGTTSTGGGG GFMVVHGGGG SRFRFRECLK NQAVNIGGHA VDGCGEFMPA
101: GIEGTIDALK CAACGCHRNF HRKELPYFHH APPQHQPPPP PPGFYRLPAP VSYRPPPSQA PPLQLALPPP QRERSEDPME TSSAEAGGGI RKRHRTKFTA
201: EQKERMLALA ERIGWRIQRQ DDEVIQRFCQ ETGVPRQVLK VWLHNNKHTL GKSPSPLHHH QAPPPPPPQS SFHHEQDQP
101: GIEGTIDALK CAACGCHRNF HRKELPYFHH APPQHQPPPP PPGFYRLPAP VSYRPPPSQA PPLQLALPPP QRERSEDPME TSSAEAGGGI RKRHRTKFTA
201: EQKERMLALA ERIGWRIQRQ DDEVIQRFCQ ETGVPRQVLK VWLHNNKHTL GKSPSPLHHH QAPPPPPPQS SFHHEQDQP
Arabidopsis Description
ZHD1Zinc-finger homeodomain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.