Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G42780.1 | KRH01172 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH18475 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH40099 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH69650 | AT5G65410.1 | 16428600 |
| AT5G42780.1 | KRH74513 | AT5G65410.1 | 16428600 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26348 | Soybean | nucleus | 93.83 | 80.0 |
| KRH26296 | Soybean | nucleus | 93.21 | 76.26 |
| KRH44088 | Soybean | nucleus | 66.05 | 73.29 |
| KRH60587 | Soybean | nucleus | 29.01 | 30.92 |
| KRH18477 | Soybean | cytosol, mitochondrion | 15.43 | 30.49 |
| KRH41884 | Soybean | nucleus | 28.4 | 30.26 |
| KRH56913 | Soybean | cytosol | 14.2 | 29.11 |
| KRH03476 | Soybean | cytosol | 13.58 | 27.85 |
| KRH01145 | Soybean | cytosol | 12.35 | 26.67 |
| KRG92484 | Soybean | nucleus | 30.86 | 26.32 |
| KRH63346 | Soybean | cytosol, mitochondrion | 14.2 | 25.84 |
| KRH54551 | Soybean | cytosol, mitochondrion | 14.2 | 25.84 |
| KRG93529 | Soybean | cytosol, mitochondrion | 15.43 | 25.77 |
| KRH40100 | Soybean | mitochondrion | 14.81 | 25.0 |
| KRH48720 | Soybean | nucleus | 31.48 | 23.39 |
| KRH40102 | Soybean | cytosol, mitochondrion | 10.49 | 23.29 |
| KRH45571 | Soybean | cytosol, nucleus | 27.78 | 23.08 |
| KRH45573 | Soybean | nucleus | 27.78 | 22.73 |
| KRH45572 | Soybean | nucleus | 27.78 | 22.73 |
| KRH38989 | Soybean | nucleus, plastid | 32.1 | 22.71 |
| KRG90132 | Soybean | cytosol | 28.4 | 22.44 |
| AT5G42780.1 | Thale cress | nucleus | 31.48 | 21.07 |
| KRH40101 | Soybean | mitochondrion | 12.35 | 20.62 |
| KRH01146 | Soybean | cytosol | 12.35 | 20.41 |
| KRG90215 | Soybean | cytosol | 26.54 | 20.28 |
| KRH51275 | Soybean | nucleus | 33.33 | 19.08 |
| KRH01880 | Soybean | nucleus | 33.33 | 18.88 |
| KRG90213 | Soybean | nucleus | 29.63 | 18.82 |
| KRG99446 | Soybean | nucleus | 29.01 | 18.8 |
| KRG90210 | Soybean | nucleus | 29.63 | 18.75 |
| KRG90211 | Soybean | cytosol | 29.63 | 18.68 |
| KRH71954 | Soybean | nucleus | 28.4 | 18.62 |
| KRH45574 | Soybean | cytosol | 29.63 | 18.39 |
| KRH71953 | Soybean | nucleus | 29.01 | 18.36 |
| KRH74513 | Soybean | nucleus | 28.4 | 18.11 |
| KRH16820 | Soybean | nucleus | 29.01 | 18.08 |
| KRH70724 | Soybean | nucleus | 32.1 | 17.87 |
| KRH72430 | Soybean | nucleus | 29.01 | 17.41 |
| KRH74865 | Soybean | nucleus | 31.48 | 17.23 |
| KRH01171 | Soybean | mitochondrion | 9.26 | 17.05 |
| KRH01172 | Soybean | nucleus | 34.57 | 16.57 |
| KRH52923 | Soybean | nucleus | 30.25 | 16.44 |
| KRH62204 | Soybean | nucleus | 29.01 | 16.04 |
| Bra027455.1-P | Field mustard | nucleus | 27.78 | 15.68 |
| KRH69650 | Soybean | nucleus | 28.4 | 15.59 |
| KRG89637 | Soybean | nucleus | 16.67 | 14.84 |
| KRH76785 | Soybean | nucleus | 28.4 | 14.51 |
| KRH18475 | Soybean | nucleus | 29.63 | 14.5 |
| KRH69909 | Soybean | nucleus | 29.01 | 14.07 |
| KRH28682 | Soybean | nucleus | 29.01 | 13.99 |
| KRH08258 | Soybean | nucleus | 28.4 | 13.98 |
| KRH50585 | Soybean | nucleus | 30.86 | 13.97 |
| KRH40099 | Soybean | nucleus, plastid | 26.54 | 13.96 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | EMBL:ACUP02007707 | EnsemblPlantsGene:GLYMA_12G168700 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:Homeodomain_ZF_HD | InterPro:IPR001356 | InterPro:IPR006456 | UniProt:K7LVE2 |
| EnsemblPlants:KRH26349 | ProteinID:KRH26349 | ProteinID:KRH26349.1 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS50071 |
| PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF16 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | UniParc:UPI000296F9A4 |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:32384067..32384806
Molecular Weight (calculated)
18779.5 Da
IEP (calculated)
9.090
GRAVY (calculated)
-0.609
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MHTHPSISIN LLLNFTMSDI NINHPLPTHE VVTYKECLHN HSTTLGHVTY DGCVKYIVGE DALLCACCGS HRNFHHKNTI FIAEPQTQTP DQVQEMRSKR
101: KKRTTFSSEQ KNKLIRFAES VGWKPRKEKK DEIESFCSEM GITRRMFVVW LSNNRHRAIN NA
101: KKRTTFSSEQ KNKLIRFAES VGWKPRKEKK DEIESFCSEM GITRRMFVVW LSNNRHRAIN NA
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLDGYQ VFKRYEATSA H
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLDGYQ VFKRYEATSA H
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.