Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45571 | Soybean | cytosol, nucleus | 54.8 | 70.26 |
| KRH45572 | Soybean | nucleus | 55.2 | 69.7 |
| KRH45573 | Soybean | nucleus | 54.8 | 69.19 |
| KRH45574 | Soybean | cytosol | 64.4 | 61.69 |
| KRG90132 | Soybean | cytosol | 49.6 | 60.49 |
| KRH74513 | Soybean | nucleus | 59.6 | 58.66 |
| KRG90215 | Soybean | cytosol | 48.4 | 57.08 |
| GSMUA_Achr7P19060_001 | Banana | nucleus | 46.0 | 55.83 |
| GSMUA_Achr3P20390_001 | Banana | nucleus | 44.8 | 54.11 |
| GSMUA_Achr5P05500_001 | Banana | nucleus | 51.2 | 53.78 |
| KRG90210 | Soybean | nucleus | 53.6 | 52.34 |
| KRH71953 | Soybean | nucleus | 53.6 | 52.34 |
| KRG90211 | Soybean | cytosol | 53.6 | 52.14 |
| KRG90213 | Soybean | nucleus | 52.8 | 51.76 |
| GSMUA_Achr6P02170_001 | Banana | nucleus | 47.6 | 51.52 |
| Os09t0466400-01 | Rice | nucleus | 57.2 | 51.25 |
| KRH69650 | Soybean | nucleus | 60.4 | 51.19 |
| KRH16820 | Soybean | nucleus | 53.2 | 51.15 |
| Zm00001d020774_P001 | Maize | nucleus | 55.6 | 50.92 |
| KRH71954 | Soybean | nucleus | 50.0 | 50.61 |
| GSMUA_Achr10P... | Banana | nucleus | 46.0 | 50.22 |
| EER96888 | Sorghum | nucleus | 58.0 | 48.01 |
| KRG92484 | Soybean | nucleus | 36.4 | 47.89 |
| TraesCS5D01G253100.1 | Wheat | nucleus | 56.0 | 47.3 |
| KRH62204 | Soybean | nucleus | 55.2 | 47.1 |
| TraesCS5B01G243800.1 | Wheat | nucleus | 55.6 | 46.8 |
| Os08t0479400-01 | Rice | nucleus | 53.6 | 46.21 |
| Zm00001d005931_P001 | Maize | nucleus | 52.8 | 46.15 |
| TraesCS5A01G246500.1 | Wheat | nucleus | 54.8 | 46.13 |
| HORVU5Hr1G069730.1 | Barley | nucleus | 55.6 | 46.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.0 | 46.0 |
| KRH52923 | Soybean | nucleus | 54.8 | 45.97 |
| KRH72430 | Soybean | nucleus | 49.6 | 45.93 |
| Zm00001d031840_P001 | Maize | nucleus | 54.4 | 44.16 |
| EES15144 | Sorghum | nucleus | 54.4 | 43.73 |
| KRH41884 | Soybean | nucleus | 26.0 | 42.76 |
| KRH60587 | Soybean | nucleus | 26.0 | 42.76 |
| KRH01145 | Soybean | cytosol | 12.8 | 42.67 |
| KRH56913 | Soybean | cytosol | 12.8 | 40.51 |
| KRH03476 | Soybean | cytosol | 12.8 | 40.51 |
| KRH63346 | Soybean | cytosol, mitochondrion | 14.4 | 40.45 |
| KRH54551 | Soybean | cytosol, mitochondrion | 14.4 | 40.45 |
| KRH18477 | Soybean | cytosol, mitochondrion | 12.8 | 39.02 |
| KRG93529 | Soybean | cytosol, mitochondrion | 14.4 | 37.11 |
| KRH51275 | Soybean | nucleus | 41.6 | 36.75 |
| KRH01880 | Soybean | nucleus | 40.8 | 35.66 |
| KRH40102 | Soybean | cytosol, mitochondrion | 10.4 | 35.62 |
| KRH40100 | Soybean | mitochondrion | 13.6 | 35.42 |
| KRH01146 | Soybean | cytosol | 13.2 | 33.67 |
| KRH44088 | Soybean | nucleus | 19.6 | 33.56 |
| KRH40101 | Soybean | mitochondrion | 12.4 | 31.96 |
| KRH48720 | Soybean | nucleus | 26.8 | 30.73 |
| KRH76785 | Soybean | nucleus | 38.0 | 29.97 |
| KRH74865 | Soybean | nucleus | 35.2 | 29.73 |
| KRH70724 | Soybean | nucleus | 34.4 | 29.55 |
| KRH69909 | Soybean | nucleus | 38.8 | 29.04 |
| KRH26349 | Soybean | nucleus | 18.8 | 29.01 |
| KRH28682 | Soybean | nucleus | 38.8 | 28.87 |
| KRH38989 | Soybean | nucleus, plastid | 26.4 | 28.82 |
| KRH08258 | Soybean | nucleus | 37.6 | 28.57 |
| KRH01172 | Soybean | nucleus | 38.0 | 28.11 |
| KRH18475 | Soybean | nucleus | 36.8 | 27.79 |
| KRH01171 | Soybean | mitochondrion | 9.6 | 27.27 |
| KRH40099 | Soybean | nucleus, plastid | 33.2 | 26.95 |
| KRH50585 | Soybean | nucleus | 35.2 | 24.58 |
| KRH26348 | Soybean | nucleus | 18.4 | 24.21 |
| KRH26296 | Soybean | nucleus | 18.8 | 23.74 |
| KRG89637 | Soybean | nucleus | 16.4 | 22.53 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100798992 | MapMan:15.5.3.13 | EMBL:ACUP02011063 | EnsemblPlantsGene:GLYMA_18G145400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 |
| UniProt:K7MS54 | EnsemblPlants:KRG99446 | ProteinID:KRG99446 | ProteinID:KRG99446.1 | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF5 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 |
| UniParc:UPI0001BA9104 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:24054607..24055931
Molecular Weight (calculated)
27269.1 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.754
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFQEHHVEA ELGMPAAAAS YEEFGMPPNH GQEEPVVAAV PVPPPANTMA RNSGKGKYQE CLKNHAVGIG GHALDGCAEF LPAGEEGTLD ALKCAACNCH
101: RNFHRKETPD GTYLLPFHHR HQPPPPPFAP YYRAPAGYLH MTGPQHATLA LPSTSGGGGT QSPREDQGDL SDPPTSGATT HGGSSSKKRF RTKFTQQQKD
201: KMLAFAEKLG WRIQKHDEGV VQEFCSETGV QRHVLKVWMH NNKHTLGKKP
101: RNFHRKETPD GTYLLPFHHR HQPPPPPFAP YYRAPAGYLH MTGPQHATLA LPSTSGGGGT QSPREDQGDL SDPPTSGATT HGGSSSKKRF RTKFTQQQKD
201: KMLAFAEKLG WRIQKHDEGV VQEFCSETGV QRHVLKVWMH NNKHTLGKKP
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.