Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51275 | Soybean | nucleus | 87.41 | 88.34 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 70.63 | 71.89 |
| PGSC0003DMT400053397 | Potato | nucleus | 58.04 | 57.84 |
| Solyc01g102980.2.1 | Tomato | nucleus | 58.39 | 57.59 |
| GSMUA_Achr6P28870_001 | Banana | nucleus | 44.76 | 56.64 |
| GSMUA_Achr1P13300_001 | Banana | nucleus | 44.76 | 56.64 |
| GSMUA_Achr10P... | Banana | nucleus | 46.15 | 54.55 |
| KRG92484 | Soybean | nucleus | 36.01 | 54.21 |
| GSMUA_Achr9P08090_001 | Banana | nucleus | 45.45 | 53.94 |
| GSMUA_Achr6P17420_001 | Banana | nucleus | 38.81 | 53.62 |
| GSMUA_Achr3P16680_001 | Banana | nucleus | 42.31 | 51.93 |
| KRH45571 | Soybean | cytosol, nucleus | 31.82 | 46.67 |
| KRH45573 | Soybean | nucleus | 32.17 | 46.46 |
| KRH45572 | Soybean | nucleus | 32.17 | 46.46 |
| KRH56913 | Soybean | cytosol | 12.59 | 45.57 |
| KRH03476 | Soybean | cytosol | 12.59 | 45.57 |
| KRH41884 | Soybean | nucleus | 24.13 | 45.39 |
| KRH18477 | Soybean | cytosol, mitochondrion | 12.94 | 45.12 |
| KRH63346 | Soybean | cytosol, mitochondrion | 13.99 | 44.94 |
| KRH54551 | Soybean | cytosol, mitochondrion | 13.99 | 44.94 |
| KRH60587 | Soybean | nucleus | 23.78 | 44.74 |
| KRH01145 | Soybean | cytosol | 11.19 | 42.67 |
| AT1G14440.1 | Thale cress | nucleus | 46.15 | 42.31 |
| CDY09363 | Canola | nucleus | 44.06 | 42.28 |
| CDY41692 | Canola | nucleus | 44.06 | 42.0 |
| Bra026589.1-P | Field mustard | nucleus | 44.06 | 42.0 |
| AT2G02540.2 | Thale cress | nucleus | 45.45 | 41.94 |
| CDX81638 | Canola | nucleus | 46.15 | 41.9 |
| Bra026830.1-P | Field mustard | nucleus | 45.8 | 41.72 |
| CDY53549 | Canola | nucleus | 45.8 | 41.72 |
| KRH16820 | Soybean | nucleus | 37.76 | 41.54 |
| CDY39311 | Canola | nucleus | 44.41 | 41.5 |
| KRG93529 | Soybean | cytosol, mitochondrion | 13.99 | 41.24 |
| CDY45257 | Canola | nucleus | 44.76 | 41.16 |
| Bra026219.1-P | Field mustard | nucleus | 44.41 | 40.97 |
| KRH74513 | Soybean | nucleus | 36.36 | 40.94 |
| KRG99446 | Soybean | nucleus | 35.66 | 40.8 |
| KRH72430 | Soybean | nucleus | 38.11 | 40.37 |
| KRH40100 | Soybean | mitochondrion | 12.94 | 38.54 |
| KRG90132 | Soybean | cytosol | 27.62 | 38.54 |
| KRH45574 | Soybean | cytosol | 34.97 | 38.31 |
| KRG90215 | Soybean | cytosol | 27.97 | 37.74 |
| KRH40102 | Soybean | cytosol, mitochondrion | 9.44 | 36.99 |
| KRH44088 | Soybean | nucleus | 18.88 | 36.99 |
| KRH69650 | Soybean | nucleus | 37.41 | 36.27 |
| KRH52923 | Soybean | nucleus | 37.41 | 35.91 |
| KRH62204 | Soybean | nucleus | 36.71 | 35.84 |
| KRH76785 | Soybean | nucleus | 39.51 | 35.65 |
| KRG90210 | Soybean | nucleus | 30.07 | 33.59 |
| KRG90213 | Soybean | nucleus | 29.72 | 33.33 |
| KRH26349 | Soybean | nucleus | 18.88 | 33.33 |
| KRH28682 | Soybean | nucleus | 39.16 | 33.33 |
| KRH71953 | Soybean | nucleus | 29.72 | 33.2 |
| KRG90211 | Soybean | cytosol | 29.72 | 33.07 |
| KRH48720 | Soybean | nucleus | 25.17 | 33.03 |
| KRH40101 | Soybean | mitochondrion | 11.19 | 32.99 |
| KRH71954 | Soybean | nucleus | 28.32 | 32.79 |
| KRH01146 | Soybean | cytosol | 11.19 | 32.65 |
| KRH38989 | Soybean | nucleus, plastid | 24.83 | 31.0 |
| KRH01171 | Soybean | mitochondrion | 9.44 | 30.68 |
| KRH69909 | Soybean | nucleus | 34.97 | 29.94 |
| KRH70724 | Soybean | nucleus | 30.42 | 29.9 |
| KRH08258 | Soybean | nucleus | 33.92 | 29.48 |
| KRH74865 | Soybean | nucleus | 30.42 | 29.39 |
| KRH26348 | Soybean | nucleus | 19.23 | 28.95 |
| KRH26296 | Soybean | nucleus | 19.93 | 28.79 |
| KRH01172 | Soybean | nucleus | 33.22 | 28.11 |
| KRH18475 | Soybean | nucleus | 32.17 | 27.79 |
| KRH40099 | Soybean | nucleus, plastid | 27.62 | 25.65 |
| KRH50585 | Soybean | nucleus | 31.12 | 24.86 |
| KRG89637 | Soybean | nucleus | 15.73 | 24.73 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100803037 | MapMan:15.5.3.13 | EMBL:ACUP02010288 | EnsemblPlantsGene:GLYMA_17G002200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | UniProt:I1MQT9 |
| InterPro:IPR006456 | EnsemblPlants:KRH01880 | ProteinID:KRH01880 | ProteinID:KRH01880.1 | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF19 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 |
| UniParc:UPI000233F4F8 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:253745..256069
Molecular Weight (calculated)
31798.6 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.855
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSSQEGEI PIPINSSTTY GHGNGHGHGH GHGLMIHHDH NHIISSSAPS NGIPTTMQQQ EEEEEEEDRY KKVVRYRECL KNHAAAMGGN ATDGCGEFMP
101: SGKEGSIEAL NCSACHCHRN FHRKEVEGEP QHHLNINRRR LILGPHPEAL GYPTAAARSV PPHQMIMPYN IGIGHHLPSE SDEQEDAAAG AGMVQLSSRP
201: SSAQLVKKRF RTKFSQDQKD KMLNFAEKVG WKIQKQEESV VQHFCQEIGV KRRVLKVWMH NNKHNLAKKI NPPTTTAPPP PPPPPP
101: SGKEGSIEAL NCSACHCHRN FHRKEVEGEP QHHLNINRRR LILGPHPEAL GYPTAAARSV PPHQMIMPYN IGIGHHLPSE SDEQEDAAAG AGMVQLSSRP
201: SSAQLVKKRF RTKFSQDQKD KMLNFAEKVG WKIQKQEESV VQHFCQEIGV KRRVLKVWMH NNKHNLAKKI NPPTTTAPPP PPPPPP
001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
Arabidopsis Description
ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.