Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52923 | Soybean | nucleus | 95.22 | 93.62 |
| KRH16820 | Soybean | nucleus | 64.16 | 72.31 |
| KRH72430 | Soybean | nucleus | 61.77 | 67.04 |
| KRG99446 | Soybean | nucleus | 47.1 | 55.2 |
| KRH74513 | Soybean | nucleus | 46.76 | 53.94 |
| KRH45571 | Soybean | cytosol, nucleus | 35.84 | 53.85 |
| KRH45572 | Soybean | nucleus | 35.84 | 53.03 |
| KRH45573 | Soybean | nucleus | 35.84 | 53.03 |
| KRG92484 | Soybean | nucleus | 32.76 | 50.53 |
| KRG90132 | Soybean | cytosol | 33.79 | 48.29 |
| KRH69650 | Soybean | nucleus | 45.73 | 45.42 |
| KRG90215 | Soybean | cytosol | 32.76 | 45.28 |
| KRH54551 | Soybean | cytosol, mitochondrion | 13.65 | 44.94 |
| KRH63346 | Soybean | cytosol, mitochondrion | 13.65 | 44.94 |
| KRH45574 | Soybean | cytosol | 39.93 | 44.83 |
| KRH03476 | Soybean | cytosol | 11.95 | 44.3 |
| KRH56913 | Soybean | cytosol | 11.95 | 44.3 |
| KRH60587 | Soybean | nucleus | 22.87 | 44.08 |
| KRH41884 | Soybean | nucleus | 22.53 | 43.42 |
| KRG90210 | Soybean | nucleus | 37.54 | 42.97 |
| KRH18477 | Soybean | cytosol, mitochondrion | 11.95 | 42.68 |
| KRH71953 | Soybean | nucleus | 37.2 | 42.58 |
| KRG90211 | Soybean | cytosol | 37.2 | 42.41 |
| KRG90213 | Soybean | nucleus | 36.52 | 41.96 |
| KRH01145 | Soybean | cytosol | 10.58 | 41.33 |
| KRH71954 | Soybean | nucleus | 34.47 | 40.89 |
| KRG93529 | Soybean | cytosol, mitochondrion | 12.97 | 39.18 |
| KRH51275 | Soybean | nucleus | 37.2 | 38.52 |
| KRH40102 | Soybean | cytosol, mitochondrion | 9.56 | 38.36 |
| KRH01146 | Soybean | cytosol | 12.29 | 36.73 |
| KRH01880 | Soybean | nucleus | 35.84 | 36.71 |
| KRH40100 | Soybean | mitochondrion | 11.6 | 35.42 |
| KRH40101 | Soybean | mitochondrion | 11.6 | 35.05 |
| KRH01171 | Soybean | mitochondrion | 9.9 | 32.95 |
| KRH44088 | Soybean | nucleus | 15.7 | 31.51 |
| KRH28682 | Soybean | nucleus | 35.84 | 31.25 |
| KRH76785 | Soybean | nucleus | 33.79 | 31.23 |
| KRH48720 | Soybean | nucleus | 23.21 | 31.19 |
| KRH26349 | Soybean | nucleus | 16.04 | 29.01 |
| KRH70724 | Soybean | nucleus | 28.67 | 28.87 |
| KRH38989 | Soybean | nucleus, plastid | 22.53 | 28.82 |
| KRH74865 | Soybean | nucleus | 28.33 | 28.04 |
| KRH08258 | Soybean | nucleus | 31.06 | 27.66 |
| KRH69909 | Soybean | nucleus | 31.06 | 27.25 |
| KRH18475 | Soybean | nucleus | 30.03 | 26.59 |
| KRH01172 | Soybean | nucleus | 29.69 | 25.74 |
| KRH40099 | Soybean | nucleus, plastid | 25.6 | 24.35 |
| KRH26348 | Soybean | nucleus | 15.7 | 24.21 |
| KRH26296 | Soybean | nucleus | 16.04 | 23.74 |
| KRH50585 | Soybean | nucleus | 27.3 | 22.35 |
| KRG89637 | Soybean | nucleus | 12.29 | 19.78 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100794438 | MapMan:15.5.3.13 | EMBL:ACUP02002227 | EnsemblPlantsGene:GLYMA_04G093300 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | UniProt:I1JV50 |
| InterPro:IPR006456 | EnsemblPlants:KRH62204 | ProteinID:KRH62204 | ProteinID:KRH62204.1 | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF5 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 |
| UniParc:UPI00023397E5 | InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:8269624..8271599
Molecular Weight (calculated)
31990.0 Da
IEP (calculated)
6.553
GRAVY (calculated)
-0.784
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFDEHEDQE EEEEEEMGFS VAAASYDSLG NAAVRSKMSG GEGVAVTGNS GRKGTLRYRE CQKNHAVSIG GQAVDGCCEF LAAGEEGTLE AVICAACNCH
101: RNFHRKEIDG ETSPYRQRSQ PQPQPLHPQY HHQFSPYYHR APPPSAAGYL HHHLVTPPVS QHRPLALPPL ASGGVFSREE EDMSNPSSSG GGGGFSGGGG
201: GSGSGTKKRF RTKFTQEQKD KMLAFAEELG WRIQKHDEVA VEQFCAETCV KRHVLKVWMH NNKHTLANSE QRSAGNGSNH LNSTTIIENS QLS
101: RNFHRKEIDG ETSPYRQRSQ PQPQPLHPQY HHQFSPYYHR APPPSAAGYL HHHLVTPPVS QHRPLALPPL ASGGVFSREE EDMSNPSSSG GGGGFSGGGG
201: GSGSGTKKRF RTKFTQEQKD KMLAFAEELG WRIQKHDEVA VEQFCAETCV KRHVLKVWMH NNKHTLANSE QRSAGNGSNH LNSTTIIENS QLS
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.