Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G42780.1 | KRH01172 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH18475 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH40099 | AT5G39760.1 | 16428600 |
| AT5G42780.1 | KRH69650 | AT5G65410.1 | 16428600 |
| AT5G42780.1 | KRH74513 | AT5G65410.1 | 16428600 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26349 | Soybean | nucleus | 73.29 | 66.05 |
| KRH26348 | Soybean | nucleus | 71.92 | 55.26 |
| KRH26296 | Soybean | nucleus | 73.29 | 54.04 |
| KRH18477 | Soybean | cytosol, mitochondrion | 17.81 | 31.71 |
| KRH01145 | Soybean | cytosol | 15.75 | 30.67 |
| KRH03476 | Soybean | cytosol | 16.44 | 30.38 |
| KRH56913 | Soybean | cytosol | 16.44 | 30.38 |
| KRH60587 | Soybean | nucleus | 31.51 | 30.26 |
| KRH41884 | Soybean | nucleus | 30.82 | 29.61 |
| KRH54551 | Soybean | cytosol, mitochondrion | 17.12 | 28.09 |
| KRH63346 | Soybean | cytosol, mitochondrion | 17.12 | 28.09 |
| KRG93529 | Soybean | cytosol, mitochondrion | 17.81 | 26.8 |
| KRH40102 | Soybean | cytosol, mitochondrion | 13.01 | 26.03 |
| KRG92484 | Soybean | nucleus | 33.56 | 25.79 |
| KRH01146 | Soybean | cytosol | 16.44 | 24.49 |
| KRH40100 | Soybean | mitochondrion | 15.75 | 23.96 |
| KRH45572 | Soybean | nucleus | 31.51 | 23.23 |
| KRH45573 | Soybean | nucleus | 30.82 | 22.73 |
| KRH45571 | Soybean | cytosol, nucleus | 30.14 | 22.56 |
| KRH48720 | Soybean | nucleus | 33.56 | 22.48 |
| AT5G42780.1 | Thale cress | nucleus | 36.3 | 21.9 |
| KRH38989 | Soybean | nucleus, plastid | 34.25 | 21.83 |
| KRH40101 | Soybean | mitochondrion | 14.38 | 21.65 |
| KRG90132 | Soybean | cytosol | 28.77 | 20.49 |
| KRG99446 | Soybean | nucleus | 33.56 | 19.6 |
| KRH01171 | Soybean | mitochondrion | 11.64 | 19.32 |
| KRH51275 | Soybean | nucleus | 36.99 | 19.08 |
| KRH01880 | Soybean | nucleus | 36.99 | 18.88 |
| KRG90215 | Soybean | cytosol | 27.4 | 18.87 |
| KRH70724 | Soybean | nucleus | 36.99 | 18.56 |
| KRH45574 | Soybean | cytosol | 32.88 | 18.39 |
| KRH74865 | Soybean | nucleus | 36.3 | 17.91 |
| KRH71954 | Soybean | nucleus | 30.14 | 17.81 |
| KRH72430 | Soybean | nucleus | 32.88 | 17.78 |
| KRH74513 | Soybean | nucleus | 30.82 | 17.72 |
| KRH16820 | Soybean | nucleus | 31.51 | 17.69 |
| KRG90210 | Soybean | nucleus | 30.14 | 17.19 |
| KRG89637 | Soybean | nucleus | 21.23 | 17.03 |
| KRG90213 | Soybean | nucleus | 29.45 | 16.86 |
| KRH71953 | Soybean | nucleus | 29.45 | 16.8 |
| KRG90211 | Soybean | cytosol | 29.45 | 16.73 |
| KRH01172 | Soybean | nucleus | 37.67 | 16.27 |
| Bra027455.1-P | Field mustard | nucleus | 31.51 | 16.03 |
| KRH52923 | Soybean | nucleus | 32.19 | 15.77 |
| KRH62204 | Soybean | nucleus | 31.51 | 15.7 |
| KRH69650 | Soybean | nucleus | 30.82 | 15.25 |
| KRH18475 | Soybean | nucleus | 33.56 | 14.8 |
| KRH50585 | Soybean | nucleus | 35.62 | 14.53 |
| KRH76785 | Soybean | nucleus | 31.51 | 14.51 |
| KRH69909 | Soybean | nucleus | 32.19 | 14.07 |
| KRH28682 | Soybean | nucleus | 32.19 | 13.99 |
| KRH08258 | Soybean | nucleus | 31.51 | 13.98 |
| KRH40099 | Soybean | nucleus, plastid | 27.4 | 12.99 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102668663 | MapMan:15.5.3.13 | EMBL:ACUP02004908 | EnsemblPlantsGene:GLYMA_08G189000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:Homeodomain_ZF_HD | InterPro:IPR001356 | InterPro:IPR006456 |
| UniProt:K7L7J3 | EnsemblPlants:KRH44088 | ProteinID:KRH44088 | ProteinID:KRH44088.1 | PFAM:PD125774 | PFAM:PF04770 |
| PFscan:PS50071 | PFscan:PS51523 | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF16 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 |
| TIGRFAMs:TIGR01566 | UniParc:UPI00023C66AD | InterPro:ZF_HD_homeobox_Cys/His_dimer | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:15155176..15155867
Molecular Weight (calculated)
17173.8 Da
IEP (calculated)
9.865
GRAVY (calculated)
-0.754
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDINPNQPL PMDEVVTYKE CWHNHAAARG RVIYDGCLEY LVDQDNLICA CCGCHRNFHR KHTIFNGIPE TQTLDRVQGM RPKRKKRTTF SSEQRNKLIC
101: FAESVGWKPR KDKKNEIQSF CSEMGMTRRM FLIWLSNNRH RAIKKA
101: FAESVGWKPR KDKKNEIQSF CSEMGMTRRM FLIWLSNNRH RAIKKA
001: MEVREKKDEK MEMTRRKSSA LDHHRLPPYT YSQTANKEKP TTKRNGSDPD PDPDLDTNPI SISHAPRSYA RPQTTSPGKA RYRECQKNHA ASSGGHVVDG
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
101: CGEFMSSGEE GTVESLLCAA CDCHRSFHRK EIDGLFVVNF NSFGHSQRPL GSRHVSPIMM SFGGGGGCAA ESSTEDLNKF HQSFSGYGVD QFHHYQPKKR
201: FRTKFNEEQK EKMMEFAEKI GWRMTKLEDD EVNRFCREIK VKRQVFKVWM HNNKQAAKKK DL
Arabidopsis Description
ZHD6Zinc-finger homeodomain protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.