Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41692 | Canola | nucleus | 98.32 | 97.67 |
| Bra026589.1-P | Field mustard | nucleus | 96.64 | 96.0 |
| AT2G02540.2 | Thale cress | nucleus | 71.48 | 68.71 |
| CDY45257 | Canola | nucleus | 57.38 | 54.98 |
| CDX81638 | Canola | nucleus | 57.38 | 54.29 |
| CDY53549 | Canola | nucleus | 56.71 | 53.82 |
| CDY39311 | Canola | nucleus | 54.36 | 52.94 |
| GSMUA_Achr1P13300_001 | Banana | nucleus | 39.26 | 51.77 |
| GSMUA_Achr6P28870_001 | Banana | nucleus | 38.26 | 50.44 |
| GSMUA_Achr6P17420_001 | Banana | nucleus | 34.9 | 50.24 |
| CDX81897 | Canola | mitochondrion | 14.77 | 50.0 |
| CDX83807 | Canola | mitochondrion | 14.77 | 50.0 |
| CDX86404 | Canola | mitochondrion | 15.1 | 49.45 |
| CDX85228 | Canola | mitochondrion, nucleus | 15.1 | 49.45 |
| GSMUA_Achr3P16680_001 | Banana | nucleus | 38.59 | 49.36 |
| CDY21695 | Canola | mitochondrion | 14.43 | 48.86 |
| CDY26722 | Canola | mitochondrion | 14.43 | 48.86 |
| CDY19248 | Canola | mitochondrion | 14.43 | 48.86 |
| CDX96695 | Canola | mitochondrion | 14.43 | 48.86 |
| GSMUA_Achr9P08090_001 | Banana | nucleus | 38.59 | 47.72 |
| GSMUA_Achr10P... | Banana | nucleus | 38.59 | 47.52 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 43.96 | 46.62 |
| KRH51275 | Soybean | nucleus | 42.62 | 44.88 |
| CDX96558 | Canola | mitochondrion | 14.09 | 44.68 |
| KRH01880 | Soybean | nucleus | 42.28 | 44.06 |
| CDY08945 | Canola | nucleus | 30.87 | 43.81 |
| CDX73105 | Canola | mitochondrion | 13.76 | 43.62 |
| CDX88950 | Canola | nucleus | 30.54 | 43.33 |
| CDY20009 | Canola | mitochondrion | 14.09 | 42.86 |
| PGSC0003DMT400053397 | Potato | nucleus | 40.94 | 42.51 |
| Solyc01g102980.2.1 | Tomato | nucleus | 41.28 | 42.41 |
| CDY24844 | Canola | nucleus | 29.87 | 42.38 |
| CDY00105 | Canola | mitochondrion | 13.76 | 41.84 |
| CDY34299 | Canola | nucleus | 31.54 | 41.78 |
| CDY03431 | Canola | nucleus | 30.87 | 41.26 |
| CDX85849 | Canola | mitochondrion | 13.09 | 40.21 |
| CDX68172 | Canola | mitochondrion | 13.09 | 40.21 |
| CDX77960 | Canola | nucleus | 27.18 | 36.99 |
| CDY54719 | Canola | nucleus | 29.53 | 36.51 |
| CDX73775 | Canola | nucleus | 26.17 | 36.28 |
| CDX88760 | Canola | nucleus | 21.81 | 35.91 |
| CDY69628 | Canola | nucleus | 21.48 | 35.75 |
| CDY37252 | Canola | nucleus | 31.21 | 35.63 |
| CDY62531 | Canola | nucleus | 31.21 | 35.36 |
| CDX81284 | Canola | nucleus | 30.2 | 35.29 |
| CDY37827 | Canola | nucleus | 31.54 | 34.56 |
| CDY33960 | Canola | nucleus | 30.87 | 34.2 |
| CDX95914 | Canola | nucleus | 26.17 | 33.77 |
| CDY70550 | Canola | nucleus | 28.86 | 33.46 |
| CDY45419 | Canola | nucleus | 31.88 | 32.99 |
| CDX90679 | Canola | nucleus | 26.85 | 32.92 |
| CDY70108 | Canola | nucleus | 29.19 | 32.83 |
| CDX85886 | Canola | nucleus | 32.21 | 32.65 |
| CDY44079 | Canola | nucleus | 27.52 | 32.16 |
| CDY28566 | Canola | nucleus | 27.52 | 32.16 |
| CDX68137 | Canola | nucleus | 31.88 | 31.99 |
| CDY71124 | Canola | nucleus | 27.52 | 31.91 |
| CDY14559 | Canola | nucleus | 31.21 | 31.74 |
| CDX73152 | Canola | nucleus | 31.54 | 31.44 |
| CDY28987 | Canola | nucleus | 25.84 | 31.43 |
| CDY01760 | Canola | nucleus | 26.85 | 31.25 |
| KXG23238 | Sorghum | nucleus | 33.56 | 30.49 |
| CDX69541 | Canola | nucleus | 26.85 | 30.42 |
| CDY20008 | Canola | nucleus | 28.19 | 29.89 |
| CDY46298 | Canola | cytosol | 8.39 | 29.76 |
| Zm00001d041780_P001 | Maize | nucleus | 33.89 | 28.94 |
| TraesCS4D01G086300.1 | Wheat | nucleus | 36.91 | 28.28 |
| KXG28111 | Sorghum | nucleus | 36.91 | 27.92 |
| Os11t0243300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 38.59 | 27.58 |
| CDY00104 | Canola | nucleus | 28.86 | 27.56 |
| TraesCS4B01G089700.1 | Wheat | nucleus | 36.58 | 27.46 |
| TraesCS4A01G226800.1 | Wheat | nucleus | 36.58 | 27.18 |
| CDX74428 | Canola | nucleus | 28.52 | 26.81 |
| Os12t0208900-00 | Rice | nucleus | 19.46 | 26.13 |
| CDY56033 | Canola | nucleus | 24.16 | 25.99 |
| HORVU4Hr1G015250.6 | Barley | nucleus, plastid | 36.58 | 25.95 |
| Zm00001d049000_P001 | Maize | plastid | 36.24 | 25.71 |
| CDX85059 | Canola | nucleus | 20.13 | 25.21 |
| CDX85230 | Canola | nucleus | 28.19 | 24.78 |
| CDX86403 | Canola | nucleus | 27.85 | 24.13 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.13 | GO:A0A078FBQ6 | UniProt:A0A078FBQ6 | EnsemblPlants:CDY09363 | ProteinID:CDY09363 |
| ProteinID:CDY09363.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00030829001 |
| InterPro:Homeobox-like_sf | InterPro:Homeodomain_ZF_HD | InterPro:IPR006456 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 |
| PANTHER:PTHR31948 | PANTHER:PTHR31948:SF19 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01565 | TIGRFAMs:TIGR01566 | UniParc:UPI0004EE91CD |
| InterPro:ZF_HD_homeobox_Cys/His_dimer | SEG:seg | : | : | : | : |
Description
BnaA02g26470DBnaA02g26470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBQ6]
Coordinates
chrLK031995:-:241207..242716
Molecular Weight (calculated)
34073.9 Da
IEP (calculated)
8.430
GRAVY (calculated)
-1.103
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVASQEEHD MPIPINTTHG GHGHMIHRHH DHRHHNPANS THPNQLMVLS NGNGFGQNHD DPDHHNVGYN IMISNNKEKH VVNKYKECLK NHAASTGGHA
101: IDGCGEFMPS GEEGSIEALT CSACHCHRNF HRREIEGEDK TYFSPYHHNQ PQRNPMFHHH HKMTRSPLPQ QMIMPLGVAT TTVSNSESEE DIPFQQPPPP
201: YNHGGHNQKK RLRTKFTQEQ KEKMLSFAER IGWKMQRQEE SVVQKFCQEI GVRRRVLKVW IHNNKHNLSK KSNNNNVEIS ASNNDINKAL TGNRASSS
101: IDGCGEFMPS GEEGSIEALT CSACHCHRNF HRREIEGEDK TYFSPYHHNQ PQRNPMFHHH HKMTRSPLPQ QMIMPLGVAT TTVSNSESEE DIPFQQPPPP
201: YNHGGHNQKK RLRTKFTQEQ KEKMLSFAER IGWKMQRQEE SVVQKFCQEI GVRRRVLKVW IHNNKHNLSK KSNNNNVEIS ASNNDINKAL TGNRASSS
001: MEIASQEDPI PINTSYGNSG GGHGNMNHHH HANSAPSSLN ITTSNPLLVS SNSNGLGKNH DHSHHHHVGY NIMVTNIKKE KPVVIKYKEC LKNHAATMGG
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
101: NAIDGCGEFM PSGEEGSIEA LTCSVCNCHR NFHRRETEGE EKTFFSPYLN HHQPPPQQRK LMFHHKMIKS PLPQQMIMPI GVTTAGSNSE SEDLMEEEGG
201: GSLTFRQPPP PPSPYSYGHN QKKRFRTKFT QEQKEKMISF AERVGWKIQR QEESVVQQLC QEIGIRRRVL KVWMHNNKQN LSKKSNNVSN NVDLSAGNND
301: ITENLASTNP
Arabidopsis Description
ZHD3Zinc-finger homeodomain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O64722]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.