Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96695 | Canola | mitochondrion | 90.91 | 90.91 |
| CDY26722 | Canola | mitochondrion | 90.91 | 90.91 |
| CDX81897 | Canola | mitochondrion | 90.91 | 90.91 |
| CDY19248 | Canola | mitochondrion | 90.91 | 90.91 |
| CDY21695 | Canola | mitochondrion | 88.64 | 88.64 |
| AT1G18835.1 | Thale cress | mitochondrion | 87.5 | 87.5 |
| KRH63346 | Soybean | cytosol, mitochondrion | 77.27 | 76.4 |
| KRH54551 | Soybean | cytosol, mitochondrion | 77.27 | 76.4 |
| CDX96558 | Canola | mitochondrion | 79.55 | 74.47 |
| CDX73105 | Canola | mitochondrion | 79.55 | 74.47 |
| CDX68172 | Canola | mitochondrion | 81.82 | 74.23 |
| CDX85849 | Canola | mitochondrion | 81.82 | 74.23 |
| KRH56913 | Soybean | cytosol | 65.91 | 73.42 |
| KRH03476 | Soybean | cytosol | 64.77 | 72.15 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 67.05 | 71.08 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 65.91 | 69.88 |
| CDX86404 | Canola | mitochondrion | 64.77 | 62.64 |
| VIT_01s0026g02450.t01 | Wine grape | cytosol | 60.23 | 62.35 |
| CDX85228 | Canola | mitochondrion, nucleus | 63.64 | 61.54 |
| CDY20009 | Canola | mitochondrion | 67.05 | 60.2 |
| CDY00105 | Canola | mitochondrion | 67.05 | 60.2 |
| CDY46298 | Canola | cytosol | 20.45 | 21.43 |
| CDY24844 | Canola | nucleus | 47.73 | 20.0 |
| CDY34299 | Canola | nucleus | 51.14 | 20.0 |
| CDY08945 | Canola | nucleus | 47.73 | 20.0 |
| CDX88950 | Canola | nucleus | 47.73 | 20.0 |
| CDY03431 | Canola | nucleus | 50.0 | 19.73 |
| CDX77960 | Canola | nucleus | 45.45 | 18.26 |
| CDX73775 | Canola | nucleus | 44.32 | 18.14 |
| CDY54719 | Canola | nucleus | 48.86 | 17.84 |
| CDX81284 | Canola | nucleus | 50.0 | 17.25 |
| CDX90679 | Canola | nucleus | 46.59 | 16.87 |
| CDY28987 | Canola | nucleus | 46.59 | 16.73 |
| CDY69628 | Canola | nucleus | 32.95 | 16.2 |
| CDY37252 | Canola | nucleus | 47.73 | 16.09 |
| CDX88760 | Canola | nucleus | 32.95 | 16.02 |
| CDY62531 | Canola | nucleus | 47.73 | 15.97 |
| CDY70550 | Canola | nucleus | 45.45 | 15.56 |
| CDY70108 | Canola | nucleus | 46.59 | 15.47 |
| CDX95914 | Canola | nucleus | 39.77 | 15.15 |
| CDY09363 | Canola | nucleus | 50.0 | 14.77 |
| CDY37827 | Canola | nucleus | 45.45 | 14.71 |
| CDY14559 | Canola | nucleus | 48.86 | 14.68 |
| CDY41692 | Canola | nucleus | 50.0 | 14.67 |
| CDY45419 | Canola | nucleus | 47.73 | 14.58 |
| CDY33960 | Canola | nucleus | 44.32 | 14.5 |
| CDY01760 | Canola | nucleus | 42.05 | 14.45 |
| CDY20008 | Canola | nucleus | 45.45 | 14.23 |
| CDX69541 | Canola | nucleus | 42.05 | 14.07 |
| CDX73152 | Canola | nucleus | 47.73 | 14.05 |
| CDY71124 | Canola | nucleus | 40.91 | 14.01 |
| CDY44079 | Canola | nucleus | 39.77 | 13.73 |
| CDY28566 | Canola | nucleus | 39.77 | 13.73 |
| CDY56033 | Canola | nucleus | 43.18 | 13.72 |
| CDY53549 | Canola | nucleus | 48.86 | 13.69 |
| CDX81638 | Canola | nucleus | 48.86 | 13.65 |
| CDX85886 | Canola | nucleus | 45.45 | 13.61 |
| CDX68137 | Canola | nucleus | 45.45 | 13.47 |
| CDY39311 | Canola | nucleus | 46.59 | 13.4 |
| CDY45257 | Canola | nucleus | 46.59 | 13.18 |
| CDY00104 | Canola | nucleus | 46.59 | 13.14 |
| CDX74428 | Canola | nucleus | 43.18 | 11.99 |
| CDX85230 | Canola | nucleus | 45.45 | 11.8 |
| CDX86403 | Canola | nucleus | 45.45 | 11.63 |
| CDX85059 | Canola | nucleus | 23.86 | 8.82 |
Protein Annotations
| EnsemblPlants:CDX83807 | EnsemblPlantsGene:GSBRNA2T00139558001 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | ProteinID:CDX83807 | ProteinID:CDX83807.1 | TIGRFAMs:TIGR01566 |
| UniParc:UPI0004EE21B5 | MapMan:15.5.3.13 | : | : | : | : |
Description
BnaC08g18380D
Coordinates
chrLK031834:+:563253..563519
Molecular Weight (calculated)
9641.4 Da
IEP (calculated)
8.701
GRAVY (calculated)
-0.647
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKRQVVIKQ RKNSCTTPSS SSKVRYVECQ KNHAANIGGY AVDGCREFMA SGGEGTNDAL TCAACGCHRN FHRREVETEV VCAYSPPN
1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN
Arabidopsis Description
MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.