Factsheet for AT1G18835.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

endoplasmic reticulum 1
golgi 1
extracellular 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81897	Canola	mitochondrion	90.91	90.91
Bra025688.1-P	Field mustard	mitochondrion	90.91	90.91
CDY26722	Canola	mitochondrion	90.91	90.91
CDY19248	Canola	mitochondrion	90.91	90.91
Bra016538.1-P	Field mustard	mitochondrion	89.77	89.77
CDX96695	Canola	mitochondrion	89.77	89.77
CDX83807	Canola	mitochondrion	87.5	87.5
KRH54551	Soybean	cytosol, mitochondrion	78.41	77.53
KRH63346	Soybean	cytosol, mitochondrion	78.41	77.53
AT1G74660.1	Thale cress	mitochondrion	87.5	75.49
Solyc03g116070.1.1	Tomato	mitochondrion	69.32	73.49
PGSC0003DMT400050286	Potato	mitochondrion	68.18	72.29
KRH56913	Soybean	cytosol	63.64	70.89
KRH03476	Soybean	cytosol	62.5	69.62
VIT_01s0026g02450.t01	Wine grape	cytosol	57.95	60.0
AT3G28917.1	Thale cress	mitochondrion	65.91	58.0
GSMUA_AchrUn_...	Banana	cytosol	51.14	48.39
Os08t0438100-01	Rice	cytosol	44.32	41.94
TraesCS5A01G227200.1	Wheat	mitochondrion	44.32	41.94
TraesCS5B01G226000.1	Wheat	mitochondrion	44.32	41.94
TraesCS5D01G234700.1	Wheat	mitochondrion	44.32	41.94
GSMUA_Achr6P30650_001	Banana	mitochondrion	44.32	41.05
Zm00001d032177_P001	Maize	mitochondrion	50.0	36.97
KXG35630	Sorghum	nucleus	43.18	34.55
Zm00001d020459_P001	Maize	mitochondrion	43.18	34.23
KXG25227	Sorghum	mitochondrion	48.86	33.86
Zm00001d050452_P001	Maize	mitochondrion	47.73	33.07
AT4G24660.2	Thale cress	nucleus	48.86	18.61
AT1G69600.1	Thale cress	nucleus	43.18	15.7
AT3G50890.1	Thale cress	nucleus	44.32	15.66
AT5G42780.1	Thale cress	nucleus	42.05	15.29
AT2G18350.1	Thale cress	nucleus	44.32	14.89
AT5G65410.1	Thale cress	nucleus	46.59	14.7
AT5G15210.1	Thale cress	nucleus	44.32	14.39
AT3G28920.1	Thale cress	nucleus	48.86	13.78
AT2G02540.2	Thale cress	nucleus	47.73	13.55
AT1G14440.1	Thale cress	nucleus	46.59	13.14
AT5G60480.1	Thale cress	nucleus	32.95	13.0
AT1G75240.1	Thale cress	nucleus	43.18	12.3
AT5G39760.1	Thale cress	nucleus	44.32	11.68

Protein Annotations

MapMan:15.5.3.13	EntrezGene:5007704	UniProt:A0A178W7X3	EMBL:AC011809	ProteinID:AEE29768.1	ArrayExpress:AT1G18835
EnsemblPlantsGene:AT1G18835	RefSeq:AT1G18835	TAIR:AT1G18835	RefSeq:AT1G18835-TAIR-G	EnsemblPlants:AT1G18835.1	TAIR:AT1G18835.1
EMBL:DQ217608	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042803
GO:GO:0046872	GO:GO:0048509	InterPro:IPR006456	Symbol:MIF3	RefSeq:NP_001077560.1	ProteinID:OAP13851.1
PFAM:PD125774	PFAM:PF04770	PO:PO:0007131	PO:PO:0009001	PO:PO:0009005	PO:PO:0009025
PO:PO:0009046	PO:PO:0009047	PFscan:PS51523	PANTHER:PTHR31948	PANTHER:PTHR31948:SF45	UniProt:Q2Q493
TIGRFAMs:TIGR01566	UniParc:UPI000067B375	InterPro:ZF_HD_homeobox_Cys/His_dimer	SEG:seg	:	:

Description

MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]

Coordinates

chr1:-:6495844..6496491

Molecular Weight (calculated)

9751.4 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.682

Length

88 amino acids

Sequence
(BLAST)

1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.