Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g116070.1.1 | Tomato | mitochondrion | 98.8 | 98.8 |
| KRH54551 | Soybean | cytosol, mitochondrion | 73.49 | 68.54 |
| KRH63346 | Soybean | cytosol, mitochondrion | 73.49 | 68.54 |
| KRH03476 | Soybean | cytosol | 65.06 | 68.35 |
| KRH56913 | Soybean | cytosol | 65.06 | 68.35 |
| Bra025688.1-P | Field mustard | mitochondrion | 72.29 | 68.18 |
| CDY19248 | Canola | mitochondrion | 72.29 | 68.18 |
| CDY26722 | Canola | mitochondrion | 72.29 | 68.18 |
| AT1G18835.1 | Thale cress | mitochondrion | 72.29 | 68.18 |
| CDX81897 | Canola | mitochondrion | 71.08 | 67.05 |
| CDX83807 | Canola | mitochondrion | 69.88 | 65.91 |
| Bra016538.1-P | Field mustard | mitochondrion | 68.67 | 64.77 |
| CDX96695 | Canola | mitochondrion | 68.67 | 64.77 |
| VIT_01s0026g02450.t01 | Wine grape | cytosol | 60.24 | 58.82 |
| PGSC0003DMT400090846 | Potato | cytosol | 36.14 | 24.79 |
| PGSC0003DMT400086860 | Potato | cytosol | 34.94 | 24.37 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 37.35 | 21.09 |
| PGSC0003DMT400084919 | Potato | nucleus | 37.35 | 17.71 |
| PGSC0003DMT400083993 | Potato | nucleus | 37.35 | 17.32 |
| PGSC0003DMT400033624 | Potato | nucleus | 45.78 | 15.83 |
| PGSC0003DMT400060623 | Potato | nucleus | 43.37 | 14.81 |
| PGSC0003DMT400009581 | Potato | nucleus | 44.58 | 13.03 |
| PGSC0003DMT400053397 | Potato | nucleus | 43.37 | 12.54 |
| PGSC0003DMT400080288 | Potato | nucleus | 40.96 | 11.85 |
| PGSC0003DMT400009033 | Potato | nucleus | 40.96 | 11.26 |
| PGSC0003DMT400035635 | Potato | nucleus | 38.55 | 10.42 |
| PGSC0003DMT400034368 | Potato | nucleus | 42.17 | 10.12 |
| PGSC0003DMT400017840 | Potato | nucleus | 39.76 | 10.03 |
| PGSC0003DMT400044269 | Potato | nucleus | 42.17 | 8.35 |
| PGSC0003DMT400044270 | Potato | cytosol | 45.78 | 4.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400050286 | EnsemblPlantsGene:PGSC0003DMG400019534 | EntrezGene:102601125 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 |
| PANTHER:PTHR31948:SF45 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PGSC:PGSC0003DMG400019534 | RefSeq:XP_006364600.1 |
| SEG:seg | TIGRFAMs:TIGR01566 | UniParc:UPI000296C56D | UniProt:M1BQ29 | MapMan:15.5.3.13 | : |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400019534]
Coordinates
chr3:-:55859016..55859501
Molecular Weight (calculated)
9051.7 Da
IEP (calculated)
8.507
GRAVY (calculated)
-0.433
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MMKKRQVVVR RISSGSSTIR NIRYVECQRN HAANIGGYAV DGCREFMATG DDGTAALTCA ACGCHRNFHR REVDGGEVVS ESS
1: MKKRQVVIKQ RKSSYTMTSS SSNVRYVECQ KNHAANIGGY AVDGCREFMA SGGDDALTCA ACGCHRNFHR REVDTEVVCE YSPPNANN
Arabidopsis Description
MIF3MIF3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7X3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.