Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400090846 | Potato | cytosol | 86.55 | 85.12 |
| Solyc01g103820.1.1 | Tomato | cytosol | 67.23 | 85.11 |
| Solyc01g103810.1.1 | Tomato | cytosol | 82.35 | 84.48 |
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 17.65 | 42.86 |
| KRH01145 | Soybean | cytosol | 23.53 | 37.33 |
| PGSC0003DMT400050286 | Potato | mitochondrion | 24.37 | 34.94 |
| Zm00001d052395_P001 | Maize | plastid | 23.53 | 32.56 |
| EES16563 | Sorghum | cytosol | 23.53 | 30.43 |
| KRH40102 | Soybean | cytosol, mitochondrion | 18.49 | 30.14 |
| EES07913 | Sorghum | cytosol | 23.53 | 28.57 |
| Zm00001d023289_P001 | Maize | cytosol | 23.53 | 28.57 |
| Zm00001d023286_P001 | Maize | cytosol | 23.53 | 28.57 |
| TraesCS3A01G448100.1 | Wheat | cytosol | 22.69 | 28.12 |
| TraesCS3A01G448000.1 | Wheat | cytosol | 22.69 | 28.12 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 23.53 | 28.0 |
| KRH40101 | Soybean | mitochondrion | 22.69 | 27.84 |
| TraesCS5D01G149400.1 | Wheat | cytosol | 21.85 | 27.66 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 21.85 | 27.66 |
| TraesCS5A01G142700.1 | Wheat | cytosol | 21.85 | 27.66 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 21.85 | 27.66 |
| TraesCS3B01G484100.1 | Wheat | cytosol | 21.85 | 27.08 |
| KRH40100 | Soybean | mitochondrion | 21.85 | 27.08 |
| Os11t0128300-01 | Rice | cytosol, plastid | 23.53 | 26.67 |
| Os12t0124500-01 | Rice | cytosol, plastid | 23.53 | 26.67 |
| KRH01146 | Soybean | cytosol | 21.01 | 25.51 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 20.17 | 24.24 |
| PGSC0003DMT400084919 | Potato | nucleus | 31.09 | 21.14 |
| PGSC0003DMT400096005 | Potato | cytosol, mitochondrion, nucleus | 26.05 | 21.09 |
| PGSC0003DMT400060623 | Potato | nucleus | 32.77 | 16.05 |
| PGSC0003DMT400083993 | Potato | nucleus | 23.53 | 15.64 |
| PGSC0003DMT400033624 | Potato | nucleus | 29.41 | 14.58 |
| PGSC0003DMT400053397 | Potato | nucleus | 31.09 | 12.89 |
| PGSC0003DMT400009581 | Potato | nucleus | 30.25 | 12.68 |
| PGSC0003DMT400080288 | Potato | nucleus | 26.89 | 11.15 |
| PGSC0003DMT400017840 | Potato | nucleus | 30.25 | 10.94 |
| PGSC0003DMT400035635 | Potato | nucleus | 27.73 | 10.75 |
| PGSC0003DMT400034368 | Potato | nucleus | 31.09 | 10.69 |
| PGSC0003DMT400009033 | Potato | nucleus | 24.37 | 9.6 |
| PGSC0003DMT400044269 | Potato | nucleus | 29.41 | 8.35 |
| PGSC0003DMT400044270 | Potato | cytosol | 31.09 | 4.57 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400086860 | EnsemblPlantsGene:PGSC0003DMG400036431 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | PGSC:PGSC0003DMG400036431 | TIGRFAMs:TIGR01566 | UniParc:UPI000294B5F8 |
| UniProt:M1DCM9 | MapMan:15.5.3.13 | : | : | : | : |
Description
ZF-HD homeobox protein [Source:PGSC_GENE;Acc:PGSC0003DMG400036431]
Coordinates
chr1:-:80499210..80499569
Molecular Weight (calculated)
13675.4 Da
IEP (calculated)
9.471
GRAVY (calculated)
-0.477
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNSSSNPS GDMTIKYGIC LKNHATKFGD YSVDGCREFV KKGDDGTKEE FICANCGCFR SFHRMNSQSL YRPPVLRSRF FHPHVIPHGG GNAPIIFHPF
101: TTRVMPMQYI RRPIFYYYP
101: TTRVMPMQYI RRPIFYYYP
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.