Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g103810.1.1 | Tomato | cytosol | 84.04 | 68.1 |
| PGSC0003DMT400086860 | Potato | cytosol | 85.11 | 67.23 |
| Solyc05g018740.1.1 | Tomato | cytosol | 73.4 | 57.98 |
| Solyc05g020000.1.1 | Tomato | cytosol | 71.28 | 56.3 |
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 22.34 | 42.86 |
| KRH01145 | Soybean | cytosol | 29.79 | 37.33 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 29.79 | 33.73 |
| KRH40102 | Soybean | cytosol, mitochondrion | 24.47 | 31.51 |
| Zm00001d052395_P001 | Maize | plastid | 28.72 | 31.4 |
| Solyc03g061620.1.1 | Tomato | cytosol | 27.66 | 29.55 |
| Solyc02g067330.1.1 | Tomato | cytosol, nucleus, plastid | 31.91 | 29.41 |
| EES16563 | Sorghum | cytosol | 28.72 | 29.35 |
| KRH40101 | Soybean | mitochondrion | 28.72 | 27.84 |
| Solyc02g087970.1.1 | Tomato | mitochondrion | 26.6 | 27.78 |
| EES07913 | Sorghum | cytosol | 28.72 | 27.55 |
| Zm00001d023289_P001 | Maize | cytosol | 28.72 | 27.55 |
| Zm00001d023286_P001 | Maize | cytosol | 28.72 | 27.55 |
| KRH40100 | Soybean | mitochondrion | 27.66 | 27.08 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 28.72 | 27.0 |
| TraesCS5D01G149400.1 | Wheat | cytosol | 26.6 | 26.6 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 26.6 | 26.6 |
| TraesCS5A01G142700.1 | Wheat | cytosol | 26.6 | 26.6 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 26.6 | 26.6 |
| Os12t0124500-01 | Rice | cytosol, plastid | 28.72 | 25.71 |
| Os11t0128300-01 | Rice | cytosol, plastid | 28.72 | 25.71 |
| KRH01146 | Soybean | cytosol | 26.6 | 25.51 |
| TraesCS3A01G448000.1 | Wheat | cytosol | 25.53 | 25.0 |
| TraesCS3A01G448100.1 | Wheat | cytosol | 25.53 | 25.0 |
| TraesCS3B01G484100.1 | Wheat | cytosol | 24.47 | 23.96 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 21.28 | 20.2 |
| Solyc04g074990.2.1 | Tomato | nucleus | 26.6 | 17.48 |
| Solyc05g051420.1.1 | Tomato | nucleus | 28.72 | 16.17 |
| Solyc03g098060.1.1 | Tomato | nucleus | 24.47 | 12.85 |
| Solyc04g014260.1.1 | Tomato | nucleus | 30.85 | 11.74 |
| Solyc02g067310.2.1 | Tomato | nucleus | 35.11 | 11.3 |
| Solyc01g102980.2.1 | Tomato | nucleus | 31.91 | 10.34 |
| Solyc04g080490.2.1 | Tomato | nucleus | 31.91 | 10.34 |
| Solyc02g067320.1.1 | Tomato | nucleus | 36.17 | 10.27 |
| Solyc05g007580.1.1 | Tomato | nucleus | 30.85 | 9.76 |
| Solyc02g085160.1.1 | Tomato | nucleus | 28.72 | 9.22 |
| Solyc09g089550.2.1 | Tomato | nucleus | 35.11 | 4.1 |
Protein Annotations
| EnsemblPlants:Solyc01g103820.1.1 | EnsemblPlantsGene:Solyc01g103820.1 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | SEG:seg | TIGRFAMs:TIGR01566 | UniParc:UPI00027685ED |
| UniProt:K4B1V7 | MapMan:15.5.3.13 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:92348106..92348390
Molecular Weight (calculated)
10362.2 Da
IEP (calculated)
8.145
GRAVY (calculated)
-0.463
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MASNSSSNSN DDMTIKYGIC LKNHATKFGD YSVDGCREFV KKGDDGTKEE FICANCGCFR GFHRMNSQSL FRPPILRSCF IHAHVITHGG GHTG
1: MRKRQVVLRR ASPEEPSRSS STASSLTVRT VRYGECQKNH AAAVGGYAVD GCREFMASRG EEGTVAALTC AACGCHRSFH RREIETEVVC DCNSPPSTGN
Arabidopsis Description
MIF2Mini zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.