Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40102 | Soybean | cytosol, mitochondrion | 61.22 | 41.1 |
| VIT_14s0108g00760.t01 | Wine grape | mitochondrion | 75.51 | 38.95 |
| VIT_01s0026g02450.t01 | Wine grape | cytosol | 67.35 | 38.82 |
| KRH01145 | Soybean | cytosol | 59.18 | 38.67 |
| Zm00001d052395_P001 | Maize | plastid | 67.35 | 38.37 |
| EES16563 | Sorghum | cytosol | 71.43 | 38.04 |
| EES07913 | Sorghum | cytosol | 71.43 | 35.71 |
| Zm00001d023289_P001 | Maize | cytosol | 69.39 | 34.69 |
| Zm00001d023286_P001 | Maize | cytosol | 69.39 | 34.69 |
| Os11t0128300-01 | Rice | cytosol, plastid | 73.47 | 34.29 |
| KRH01146 | Soybean | cytosol | 67.35 | 33.67 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 67.35 | 33.0 |
| KRH40101 | Soybean | mitochondrion | 65.31 | 32.99 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 63.27 | 32.98 |
| TraesCS5D01G149400.1 | Wheat | cytosol | 63.27 | 32.98 |
| TraesCS5A01G142700.1 | Wheat | cytosol | 63.27 | 32.98 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 63.27 | 32.98 |
| Os12t0124500-01 | Rice | cytosol, plastid | 69.39 | 32.38 |
| KRH40100 | Soybean | mitochondrion | 63.27 | 32.29 |
| VIT_14s0108g00810.t01 | Wine grape | cytosol | 75.51 | 28.68 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 77.55 | 28.15 |
| Solyc01g103820.1.1 | Tomato | cytosol | 42.86 | 22.34 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 44.9 | 22.22 |
| TraesCS3B01G484100.1 | Wheat | cytosol | 42.86 | 21.88 |
| TraesCS3A01G448100.1 | Wheat | cytosol | 42.86 | 21.88 |
| TraesCS3A01G448000.1 | Wheat | cytosol | 42.86 | 21.88 |
| Solyc01g103810.1.1 | Tomato | cytosol | 44.9 | 18.97 |
| Solyc05g020000.1.1 | Tomato | cytosol | 42.86 | 17.65 |
| PGSC0003DMT400086860 | Potato | cytosol | 42.86 | 17.65 |
| Solyc05g018740.1.1 | Tomato | cytosol | 42.86 | 17.65 |
| PGSC0003DMT400090846 | Potato | cytosol | 40.82 | 16.53 |
| VIT_00s0199g00250.t01 | Wine grape | nucleus | 65.31 | 13.11 |
| VIT_17s0000g00810.t01 | Wine grape | nucleus | 40.82 | 12.9 |
| VIT_18s0001g07140.t01 | Wine grape | nucleus | 59.18 | 12.61 |
| VIT_12s0035g01880.t01 | Wine grape | nucleus | 61.22 | 10.68 |
| VIT_18s0117g00270.t01 | Wine grape | nucleus | 59.18 | 10.66 |
| VIT_18s0001g12580.t01 | Wine grape | nucleus | 61.22 | 9.49 |
| VIT_14s0108g00750.t01 | Wine grape | nucleus | 57.14 | 7.89 |
| VIT_01s0026g02460.t01 | Wine grape | nucleus | 36.73 | 7.83 |
| VIT_04s0023g01880.t01 | Wine grape | nucleus | 63.27 | 7.16 |
| VIT_07s0130g00240.t01 | Wine grape | nucleus | 12.24 | 3.03 |
| VIT_10s0042g00210.t01 | Wine grape | nucleus | 6.12 | 1.49 |
Protein Annotations
| ArrayExpress:VIT_17s0000g06200 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g06200.t01 | EnsemblPlantsGene:VIT_17s0000g06200 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer |
| PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 | PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | ProteinID:CCB43088 |
| ProteinID:CCB43088.1 | TIGRFAMs:TIGR01566 | unigene:Vvi.20530 | UniParc:UPI00021099F4 | UniProt:F6GT79 | MapMan:15.5.3.13 |
Description
No Description!
Coordinates
chr17:+:6764649..6765071
Molecular Weight (calculated)
5123.9 Da
IEP (calculated)
5.465
GRAVY (calculated)
-0.129
Length
49 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGHAVDGCR EFMASGVEGT SAAFTCAACG CHRNFHRKEV DSEVVCDSS
001: MMKKRQMVIK QRSRNSNTSS SWTTTSSSSS SSEISNVRYV ECQKNHAANI GGYAVDGCRE FMAAGVEGTV DALRCAACGC HRNFHRKEVD TEVVCEYSPP
101: NA
101: NA
Arabidopsis Description
MIF1Mini zinc finger protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA51]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.