Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g103820.1.1 | Tomato | cytosol | 68.1 | 84.04 |
| PGSC0003DMT400086860 | Potato | cytosol | 84.48 | 82.35 |
| Solyc05g018740.1.1 | Tomato | cytosol | 77.59 | 75.63 |
| Solyc05g020000.1.1 | Tomato | cytosol | 73.28 | 71.43 |
| VIT_17s0000g06200.t01 | Wine grape | cytosol | 18.97 | 44.9 |
| KRH01145 | Soybean | cytosol | 25.86 | 40.0 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 25.0 | 34.94 |
| KRH40102 | Soybean | cytosol, mitochondrion | 20.69 | 32.88 |
| Solyc03g061620.1.1 | Tomato | cytosol | 24.14 | 31.82 |
| Zm00001d052395_P001 | Maize | plastid | 23.28 | 31.4 |
| EES16563 | Sorghum | cytosol | 24.14 | 30.43 |
| Solyc02g067330.1.1 | Tomato | cytosol, nucleus, plastid | 26.72 | 30.39 |
| KRH40101 | Soybean | mitochondrion | 25.0 | 29.9 |
| KRH40100 | Soybean | mitochondrion | 24.14 | 29.17 |
| EES07913 | Sorghum | cytosol | 24.14 | 28.57 |
| Zm00001d023289_P001 | Maize | cytosol | 24.14 | 28.57 |
| Zm00001d023286_P001 | Maize | cytosol | 24.14 | 28.57 |
| Zm00001d044662_P001 | Maize | cytosol, plastid | 24.14 | 28.0 |
| Solyc02g087970.1.1 | Tomato | mitochondrion | 21.55 | 27.78 |
| TraesCS5D01G149400.1 | Wheat | cytosol | 22.41 | 27.66 |
| TraesCS5B01G141400.1 | Wheat | cytosol | 22.41 | 27.66 |
| TraesCS5A01G142700.1 | Wheat | cytosol | 22.41 | 27.66 |
| HORVU5Hr1G045580.1 | Barley | cytosol | 22.41 | 27.66 |
| KRH01146 | Soybean | cytosol | 23.28 | 27.55 |
| Os12t0124500-01 | Rice | cytosol, plastid | 24.14 | 26.67 |
| Os11t0128300-01 | Rice | cytosol, plastid | 24.14 | 26.67 |
| TraesCS3A01G448000.1 | Wheat | cytosol | 21.55 | 26.04 |
| TraesCS3A01G448100.1 | Wheat | cytosol | 21.55 | 26.04 |
| TraesCS3B01G484100.1 | Wheat | cytosol | 20.69 | 25.0 |
| HORVU3Hr1G096990.1 | Barley | cytosol | 18.1 | 21.21 |
| Solyc04g074990.2.1 | Tomato | nucleus | 25.0 | 20.28 |
| Solyc05g051420.1.1 | Tomato | nucleus | 26.72 | 18.56 |
| Solyc03g098060.1.1 | Tomato | nucleus | 24.14 | 15.64 |
| Solyc04g014260.1.1 | Tomato | nucleus | 31.03 | 14.57 |
| Solyc04g080490.2.1 | Tomato | nucleus | 31.9 | 12.76 |
| Solyc01g102980.2.1 | Tomato | nucleus | 31.03 | 12.41 |
| Solyc02g067310.2.1 | Tomato | nucleus | 31.03 | 12.33 |
| Solyc02g067320.1.1 | Tomato | nucleus | 30.17 | 10.57 |
| Solyc05g007580.1.1 | Tomato | nucleus | 26.72 | 10.44 |
| Solyc02g085160.1.1 | Tomato | nucleus | 25.0 | 9.9 |
| Solyc09g089550.2.1 | Tomato | nucleus | 30.17 | 4.35 |
Protein Annotations
| EnsemblPlants:Solyc01g103810.1.1 | EnsemblPlantsGene:Solyc01g103810.1 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 | PANTHER:PTHR31948:SF7 |
| PFAM:PD125774 | PFAM:PF04770 | PFscan:PS51523 | TIGRFAMs:TIGR01566 | UniParc:UPI00027685EC | UniProt:K4B1V6 |
| MapMan:15.5.3.13 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:92343498..92343848
Molecular Weight (calculated)
13144.8 Da
IEP (calculated)
9.639
GRAVY (calculated)
-0.364
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNSSSNPN GDITIKYGIC LKNHATKFGD YSVDGCREFV KKGDDGTKEA FICANCGCFR DFHRMNSQSL FRLAIHRSRF IHPHVMPHGG GNAPINFHPF
101: MARVMSVQYI RRPVFY
101: MARVMSVQYI RRPVFY
001: MNFEDQEEDM EMSGVNPPCG YDSLSGEGAT SSGGGGVGRS KGVGAKIRYR ECLKNHAVNI GGHAVDGCCE FMPSGEDGTL DALKCAACGC HRNFHRKETE
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
101: SIGGRAHRVP TYYNRPPQPH QPPGYLHLTS PAAPYRPPAA SGDEEDTSNP SSSGGTTKRF RTKFTAEQKE KMLAFAERLG WRIQKHDDVA VEQFCAETGV
201: RRQVLKIWMH NNKNSLGKKP
Arabidopsis Description
ATHB22homeobox protein 22 [Source:TAIR;Acc:AT4G24660]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.