Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044270 | Potato | cytosol | 92.55 | 91.98 |
| PGSC0003DMT400044269 | Potato | nucleus | 47.2 | 90.69 |
| Solyc03g061620.1.1 | Tomato | cytosol | 5.47 | 50.0 |
| TraesCS5D01G234700.1 | Wheat | mitochondrion | 5.22 | 45.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.22 | 45.16 |
| TraesCS5A01G227200.1 | Wheat | mitochondrion | 5.22 | 45.16 |
| Solyc02g067330.1.1 | Tomato | cytosol, nucleus, plastid | 5.71 | 45.1 |
| Solyc03g116070.1.1 | Tomato | mitochondrion | 4.6 | 44.58 |
| TraesCS5B01G226000.1 | Wheat | mitochondrion | 5.09 | 44.09 |
| Os08t0438100-01 | Rice | cytosol | 5.09 | 44.09 |
| Solyc02g087970.1.1 | Tomato | mitochondrion | 4.6 | 41.11 |
| GSMUA_Achr6P30650_001 | Banana | mitochondrion | 4.84 | 41.05 |
| Solyc04g074990.2.1 | Tomato | nucleus | 6.58 | 37.06 |
| Zm00001d050452_P001 | Maize | mitochondrion | 5.84 | 37.01 |
| Zm00001d032177_P001 | Maize | mitochondrion | 5.47 | 36.97 |
| Zm00001d020459_P001 | Maize | mitochondrion | 5.09 | 36.94 |
| KXG35630 | Sorghum | nucleus | 4.97 | 36.36 |
| KXG25227 | Sorghum | mitochondrion | 5.59 | 35.43 |
| Solyc01g103820.1.1 | Tomato | cytosol | 4.1 | 35.11 |
| VIT_08s0056g01130.t01 | Wine grape | nucleus | 5.59 | 33.33 |
| CDY46298 | Canola | cytosol | 3.35 | 32.14 |
| Solyc05g051420.1.1 | Tomato | nucleus | 6.34 | 30.54 |
| Solyc01g103810.1.1 | Tomato | cytosol | 4.35 | 30.17 |
| Solyc05g018740.1.1 | Tomato | cytosol | 4.22 | 28.57 |
| Bra039615.1-P | Field mustard | cytosol | 6.34 | 28.18 |
| Solyc04g014260.1.1 | Tomato | nucleus | 8.32 | 27.13 |
| Solyc05g020000.1.1 | Tomato | cytosol | 3.98 | 26.89 |
| Solyc01g102980.2.1 | Tomato | nucleus | 9.44 | 26.21 |
| Solyc02g067310.2.1 | Tomato | nucleus | 8.82 | 24.32 |
| Solyc05g007580.1.1 | Tomato | nucleus | 8.57 | 23.23 |
| Solyc04g080490.2.1 | Tomato | nucleus | 8.32 | 23.1 |
| Solyc03g098060.1.1 | Tomato | nucleus | 4.84 | 21.79 |
| Solyc02g067320.1.1 | Tomato | nucleus | 8.57 | 20.85 |
| Solyc02g085160.1.1 | Tomato | nucleus | 6.83 | 18.77 |
Protein Annotations
| EnsemblPlants:Solyc09g089550.2.1 | EnsemblPlantsGene:Solyc09g089550.2 | InterPro:DUF4283 | InterPro:IPR006456 | InterPro:ZF_HD_homeobox_Cys/His_dimer | PANTHER:PTHR31948 |
| PFAM:PD125774 | PFAM:PF04770 | PFAM:PF14111 | PFscan:PS51523 | SEG:seg | TIGRFAMs:TIGR01566 |
| UniParc:UPI000276C74E | UniProt:K4CVY2 | MapMan:15.5.3.13 | : | : | : |
Description
No Description!
Coordinates
chr9:-:69252813..69257262
Molecular Weight (calculated)
90501.3 Da
IEP (calculated)
7.364
GRAVY (calculated)
-0.587
Length
805 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPQRDFNI ENQEEPKSKI VYLNYRRVPA VIFRKKYWDW NSMVAVCKLT MVGKFFIPKP KMTKIRASFH AKLSLKGVVK IRSYDSYHVF IDFTAEEDYQ
101: SVLLKERVVV AGAIMEVFQW TPEFHDQFRE AFGVVELENT KKDEHIGGGN EYGTEESDSV ACVPEVTHSD SEDRVASPIK CETSKLPSSV GISCSEFSGL
201: SSAPYRITGR IPSVTYESSS MCSTELVPFR GTYLNHNNLK SYSREWNYGS KPTSEAADLA CETLSQPLYA LSIVERHENQ KSRPPIEVQH STYMGYPTLT
301: FPRRYGESLV SDYKLTLLGN FSYKRPKMKE IRADFKAQNP LSGQVKIRNC SSRQVLILFS NEEDYYTVLY KKAIIVAGAL MQISWSSPDF HHEVKQNIHP
401: DFRLSDAKSV NWNTDTSKLH PSINGLLAPA TDEKSMSLQV PAVSQCLSVP SICPPLPLLA HSVSVAGRLC ADRLTTSGIY VPQSYPKGIV GIPIFGSNEQ
501: AGSGNTFPRP SQALNQQSLA QQHNQLNSYK PNMTVRIAQL QPPSTTSVSD ITSSIRYREC LKNHAASMGG HALDGCGEFM PSGEEGTPGA LKCAACNCHQ
601: NFHRKEIDDY QPMDDVGSHS RFSQPRNNSS SGSIQNQVLI SLPTQQYHHD YSDSCSPRSL VDSLQPYTQP PSPTSGSVYS QQALERIQPS SIRSSYSYEM
701: VNHNTMQNGK QREYFWSDSS RNTSRDHPSV RNENWNFDMD KPLNNRTPDH IPLEFPTYPS RCQPQTVFTD EFPHLDIINN LLHEEHETGR TLMSNSGSQR
801: LNKGS
101: SVLLKERVVV AGAIMEVFQW TPEFHDQFRE AFGVVELENT KKDEHIGGGN EYGTEESDSV ACVPEVTHSD SEDRVASPIK CETSKLPSSV GISCSEFSGL
201: SSAPYRITGR IPSVTYESSS MCSTELVPFR GTYLNHNNLK SYSREWNYGS KPTSEAADLA CETLSQPLYA LSIVERHENQ KSRPPIEVQH STYMGYPTLT
301: FPRRYGESLV SDYKLTLLGN FSYKRPKMKE IRADFKAQNP LSGQVKIRNC SSRQVLILFS NEEDYYTVLY KKAIIVAGAL MQISWSSPDF HHEVKQNIHP
401: DFRLSDAKSV NWNTDTSKLH PSINGLLAPA TDEKSMSLQV PAVSQCLSVP SICPPLPLLA HSVSVAGRLC ADRLTTSGIY VPQSYPKGIV GIPIFGSNEQ
501: AGSGNTFPRP SQALNQQSLA QQHNQLNSYK PNMTVRIAQL QPPSTTSVSD ITSSIRYREC LKNHAASMGG HALDGCGEFM PSGEEGTPGA LKCAACNCHQ
601: NFHRKEIDDY QPMDDVGSHS RFSQPRNNSS SGSIQNQVLI SLPTQQYHHD YSDSCSPRSL VDSLQPYTQP PSPTSGSVYS QQALERIQPS SIRSSYSYEM
701: VNHNTMQNGK QREYFWSDSS RNTSRDHPSV RNENWNFDMD KPLNNRTPDH IPLEFPTYPS RCQPQTVFTD EFPHLDIINN LLHEEHETGR TLMSNSGSQR
801: LNKGS
001: MDMRSHEMIE RRREDNGNNN GGVVISNIIS TNIDDNCNGN NNNTRVSCNS QTLDHHQSKS PSSFSISAAA KPTVRYRECL KNHAASVGGS VHDGCGEFMP
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
101: SGEEGTIEAL RCAACDCHRN FHRKEMDGVG SSDLISHHRH HHYHHNQYGG GGGRRPPPPN MMLNPLMLPP PPNYQPIHHH KYGMSPPGGG GMVTPMSVAY
201: GGGGGGAESS SEDLNLYGQS SGEGAGAAAG QMAFSMSSSK KRFRTKFTTD QKERMMDFAE KLGWRMNKQD EEELKRFCGE IGVKRQVFKV WMHNNKNNAK
301: KPPTPTTTL
Arabidopsis Description
ZHD5ZHD5 [Source:UniProtKB/TrEMBL;Acc:A0A178WFZ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.